Eutrema salsugineum (saltwater cress): EUTSA_v10016093mg
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Entry
EUTSA_v10016093mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10016093mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EUTSA_v10016093mg
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
ODV-E18
Motif
Other DBs
NCBI-GeneID:
18019356
NCBI-ProteinID:
XP_006398887
UniProt:
V4KQY2
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MVAHKRINNPQQPTYICIILFCLLVSLSHLGRASSSSSTSTSTSTSFFNLSLPHQHPFPE
DVVLNVQRKLNDSLYRRNLLTYQQDGDTTASAPIPSCITGNPIDDCWRCDPNWSENRQRL
ADCSIGFGQGTLGGKGGRFYLVTDSSDNDAANPIPGTLRHAVIQPEPLWIVFSGDMGIRL
KHELIIGSYKTIDGRGTNVQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHV
GFRGVSDGDGISVSASHHIWVDHCSLGYCMDGLIDVILASTAVTISNNYFYHHDEVMLLG
HDDRFKVFGFDQFNPKSLIIWAILKRYTADSGMQVTIAFNHFGEGLVQRMPRCRHGYIHV
VNNDFTAWQMYAIGGSANPTINSQGNRYTAPIDPNAKQVTKRVDTNEKHWEKWNWRTEGD
VMVNGAFFVPSGDGVSPAFARATSVQAKAAAIIDQLTVNAGVFGDPSGRNGQGGGFPGIT
GGGGTITRGYSKGGPGGGGGSDSDSDDGLFSMIFGSNTSAAVALRP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggtggctcataagaggatcaataaccctcaacaaccaacatacatttgcattatcttg
ttctgcctcttggtttctctctctcaccttggaagagcatcttcttcatcatcaacctcg
acctcgacctcgacatctttcttcaatctttctctcccacaccaacacccattccctgaa
gatgtcgttcttaatgttcaaagaaaactcaacgactctctctacagaagaaaccttctc
acttaccaacaagacggcgacacgacggcgtcggctccaataccatcttgcatcaccgga
aacccaatcgacgactgctggcgttgcgacccaaactggtctgaaaatcgccaacgcctc
gccgactgctcaatcggctttggacaaggtacgctcggcggcaaaggcggtcgattttac
ctcgtcaccgattcctctgacaacgacgcggcgaacccaattcccggaacacttcgtcac
gccgtgatccagccggaacctctctggatcgtattctccggcgacatggggatcagactc
aaacacgagctcatcatcggaagctacaagacaatcgacggtcgaggcacgaatgtccaa
ataaccggccatggatgcctaacgatccagcaggtgagccacgtcatcatccacaacgtc
cacattcaccactgcaaaccctccggaaacactctggtcgcttcgtcgccgacacacgtc
ggattccgaggagtctccgacggcgacgggatctctgtctcagcttcgcatcacatttgg
gtcgatcactgctctctcggatactgtatggacgggctaatcgacgtgatacttgcatca
accgccgtcacaatctccaacaactatttctatcaccacgacgaggttatgctcttaggt
cacgacgaccgctttaaagttttcggatttgatcaatttaacccaaaaagtttgataatt
tgggcaattttgaaaaggtatacggcggactcggggatgcaggtgacaatagcattcaac
catttcggggagggactggtgcagaggatgcctcggtgtaggcacggttacatccacgtc
gtcaacaacgacttcacggcttggcaaatgtatgcaatcggtggaagtgctaaccctacc
atcaatagccagggtaaccgttacaccgcacccattgatcccaatgccaaacaggtgacg
aagcgcgtggacacaaacgagaaacactgggaaaaatggaactggaggacggaaggagac
gttatggttaacggagcgtttttcgtgccgtcaggtgacggagtcagccctgccttcgcc
agagctaccagcgttcaggcgaaagccgccgctatcattgaccagctcacggtcaacgcc
ggcgttttcggcgatcctagtgggagaaacggccaaggaggaggttttcccggaatcacg
ggcggtggtgggaccatcacacgcggttacagtaaaggtggaccaggtggcggtggcggc
agtgacagcgacagcgatgatggccttttctcaatgatattcggtagcaataccagtgcg
gcggtggctctgagaccg
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