Eutrema salsugineum (saltwater cress): EUTSA_v10016127mg
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Entry
EUTSA_v10016127mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EUTSA_v10016127mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eus02000
]
EUTSA_v10016127mg
Transporters [BR:
eus02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
EUTSA_v10016127mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_22
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
18027800
NCBI-ProteinID:
XP_006411433
UniProt:
V4P0T2
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MGTWRSQLKAMLRKNWLLKTRHPFVTSAEILLPTVVMLLLIAVRTRVDTTIHPAHSNIDK
DTVVQVGGGNSPSFPQLLKLLLAQGEFLAFAPDTDETKNMIDILSLKFPELRLVTKVFKD
DTELETYITSPHYGACSEVRNCSNPKIKGAVVFHEQGPHLFDYSIRLNHTWAFAGFPNVK
SIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNKDMPLSHSSLGS
ALPFELPWTLFSPSTIRMIPFPTREYTDDEFQSIVKSVMGLLYLLGFLYPISRLISYSVF
EKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCAGIITACTMGSLFKYSDKTLVFTYF
FLFGLSAITLSFLISTFFTRAKTAVAVGTLAFLGAFFPYYTVNDESVSMVLKVVASLLSP
TAFALGSINFADYERAHVGLRWSNIWLASSGVSFFVCLLMMLLDSILYCAIGLYLDKVLP
RENGVRYPWNFIFTKCFGRKKNNTQYRIPGQNIEVTQGEPFDPVTESISLEMRQQELDGR
CIQVRNLHKVFASGRGNCCAVNSLRLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSG
DALILGNSIVTNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVKEDSLKSTVADM
AEEVGLSDKFSTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIK
KIKKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSMFLKHHYGVGYTLTLVKTSPA
VSVAARIVHRHIPSATCVSEVGNEISFKLPLASLPCFENMFREIESCMKSSADRSRISEI
EDSDYPGIQSYGISVTTLEEVFLRVAGCNLDIEDKQEDTFVSPDTDASLVCIRSTQKSTM
QPKLLASCNEGAGVIISSIAKACKLIVAAIWTLIGFISMQCCGCSIISRSVFWRHFKALF
IKRARSACRDRKTVAFQLIIPAVFLLFGLLFLQLKPHPDQKSITLTTAYYNPLLSGNGGG
GPIPFDLSEPIAKEVAQYIKGGWIQPLKNSSYKFPNPEEALADAIDAAGPMLGPTLLSMS
EFLMSSFDQSYQSRYGAILMDAQHPDGSLGYTVLHNSTCQHAGPIYINVMHAAILRLATG
NKNMTIQTRNHPLPPTKSQRTQRHDLDAFSAAIIVNIAFSFIPASFAVPIVKEREVKAKH
QQLISGVSVLSYWLSTYVWDFVSFLFPSTFAIILFYAFGLEQFIGIGRLLPTLLMLLEYG
LAIASSTYCLTFFFTEHSMAQNVILMVHFFSGLILMVISFVMGLIPATVNANSYLKNFFR
LSPGFCFSDGLASLALLRQGMKDKSSHGVFDWNVTGASISYLALESIFYFLVTLGLELLP
VQKMMSFSIGEWWQKLKAFKQGVGSSSTEPLLDSSGAISADMEDDKDVLEERDRVISGLT
DNTIFYLQNLRKVYPGCKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEE
TPTSGTAFVFGKDIVTSPKAIRQHIGYCPQFDALFDYLTVKEHLELYARIKGVVDHRIDN
VVTEKLVEFDLLKHSYKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFM
WDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLEL
EVKPNEVSHVDLENFCQMIQQWLFNVPSQPRSLLSDLEVCIGVSDSITPDTASSSVISLS
PEMVQSIAKYLGNEQRVSTLVTPMPEEDVQIDEQLSEQLFRDGGIPLPIFAEWWLAKEKF
AALDSFIQSSFPGAAFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRIRLGVAEYSISQ
STLETIFNHFAANS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttggaggagccaattgaaggccatgcttcgcaagaattggctcctcaaaact
cgacatcccttcgttacttctgccgagattttgcttccgactgttgtaatgttgttgttg
atagctgtgaggacacgggttgacaccacaattcatccggctcactcgaacatagataaa
gatacggtggtccaagtgggcggaggtaactctcccagttttccacagcttttgaagctt
ttgcttgctcaaggggaatttttagcctttgcacctgacactgatgaaacgaagaacatg
atcgacattttgtccctaaagtttccggaattgcggctagtaactaaagtttttaaagat
gacactgagctggaaacttatataacctctcctcattatggtgcctgcagcgaagtgagg
aattgttcgaatccaaaaataaaaggagcagtggtattccatgaacaaggacctcatcta
tttgattatagcatccgcttgaaccacacatgggcattcgcaggattccctaatgttaag
tcgatcatggacacaaatggaccttatatcaatgatctggaaatgggtattaataccata
ccaacaatgcaatacagcttcagcggattcttgactcttcagcaggtggtagactctttc
attatatttgcttctcagcaaaacaaagacatgccattatcacattcatctcttggttca
gctttaccctttgagctgccatggactctgtttagcccctcaacgatacgaatgattcca
tttccaacccgcgaatacactgatgatgagtttcagtctattgtcaaaagcgtaatggga
ttgttgtatcttctaggatttctgtatccaatctcccggcttatcagctattccgttttt
gagaaggagcagaaaataagagaaggactatacatgatgggcttgaaagacgagatattc
catttgtcatggtttatcacatatgcattgcagttcgcattgtgcgctgggattattacc
gcttgtacgatgggaagtctctttaagtatagtgataagacattagtcttcacatacttc
tttttatttgggctcagcgcaatcacgctctcatttcttatatcaacattttttactcga
gcaaagacagccgtggcagttgggaccctggcctttcttggagccttcttcccttactat
actgtaaacgatgaatctgtgtccatggtactaaaggtagttgcttccttgctttcacct
actgcatttgctcttggatcaatcaactttgctgattatgagcgtgcacatgttggactt
cgttggagcaatatatggctggcatcgtctggagtaagtttttttgtctgcctcttgatg
atgctgctcgactctattctttactgcgctattggtctatatctggacaaggtcctcccc
agggaaaatggtgtgcggtacccatggaacttcattttcaccaagtgctttgggaggaag
aaaaataacacccaatatcgcattccaggtcagaatatagaggttactcagggagagcct
tttgatcctgttactgaatcaataagcctggaaatgaggcaacaagagcttgatgggaga
tgcatacaagttcgaaatctgcataaggtctttgcctcaggaagagggaattgttgtgca
gttaattcattgcgacttacattgtacgagaaccagatactttcacttctgggccataat
ggggctggtaaaagcacaacaatatcgatgcttgttggccttcttcctccaacttctgga
gatgccctgatacttggaaacagtatcgtaacaaacatggatgagatacggaaagaacta
ggtgtttgtcctcagcatgacatcctctttccagaactgacagtcagagaacacttggag
atgtttgcggttcttaaaggtgttaaggaagattccttgaagagcacagttgctgatatg
gcggaggaagtgggattgtctgataaatttagtacacttgtgcgggcactttccggaggc
atgaaaaggaaattgtcacttggaatcgcattgataggaaacagtaaggtgattattctc
gatgaaccaaccagtggaatggatccatactcaatgcgtcttacatggcagttaattaag
aaaatcaaaaagggcagaataatattgctaacaacgcattccatggatgaagctgaagaa
cttggagatcggataggaatcatggctaacggatctctcaagtgttgtggcagctcgatg
ttcctgaagcatcactacggagttggttacactcttacgctagtaaagacttctccagct
gtctctgttgccgcacgtatagttcatcgtcacattccatcagcaacctgtgtgagtgag
gtgggaaacgaaatctctttcaagcttcctttggcatccttgccttgctttgaaaacatg
ttcagagaaattgagagttgcatgaaaagttctgctgacagatctaggattagtgaaatt
gaggattcagattatcctggtattcagagttacggtatatctgttacgacacttgaagag
gtatttctgagagttgctggctgtaacttagatatcgaggataagcaggaagatacattt
gtttctcctgataccgacgcttctctggtatgcattagatctactcagaagagtactatg
caacccaaattgctagcaagttgtaacgagggtgctggagttataatttcctcaattgca
aaagcttgcaaattgatcgttgctgcaatttggactttaattggattcattagcatgcag
tgttgtggctgttctattatctcaaggtcagtgttttggcggcatttcaaagcattgttc
ataaaaagagcgaggtctgcttgcagagaccgcaaaacagtggctttccagctcatcatc
ccagcagttttcttgctttttggccttcttttccttcagctcaagccacatcctgatcaa
aaatccattacgttgacaactgcttattataatcccctcctgagtggcaacggtggtggt
ggtccgattccttttgatctgtctgagccaattgccaaagaggttgcacaatatattaaa
ggaggctggattcagcccttgaagaatagttcatataaatttcctaatccagaagaggca
ttggctgatgcaattgatgcggcaggtcctatgttggggcccactctactttctatgagc
gaatttctgatgtctagttttgatcagtcctaccagtcaaggtatggagcaattctaatg
gatgctcagcatccagatgggagtttaggatacaccgtgctacacaacagtacttgtcag
catgctggtccaatctacatcaatgttatgcatgctgcgattctccgacttgctactggt
aacaagaatatgacaattcaaacccgaaaccatcctttgccaccaacaaaaagtcagcgc
acacagcgtcatgatttggatgccttctccgctgcaattattgttaacattgcattctcg
ttcatcccagcctcctttgctgttcccattgttaaggagagggaagtgaaagcaaagcat
caacagcttattagtggggtttccgtcctttcgtactggttatcaacgtacgtatgggat
ttcgtcagtttcttatttccgtcaacatttgcaataatcctattctacgcttttggcctg
gaacagtttatcggaatcggtcggttactgccgactctcctcatgctcctggagtatggc
ttggcaattgcatcttcaacgtactgtcttacctttttctttaccgagcatagcatggct
cagaatgttattcttatggtccatttcttctctggtcttatccttatggttatctcattt
gttatgggccttattccagcgactgttaatgcaaactcatatctaaagaacttcttcaga
ttatcaccaggattttgcttctctgatggattggcttcattagctcttctaaggcagggc
atgaaagataaatccagtcatggggtgtttgattggaatgtcactggagcgtccatttct
tacctagctttggagagtatattctacttcctcgtgactcttgggcttgagctcctgcct
gttcaaaagatgatgtctttctcaattggggagtggtggcagaaattaaaagctttcaaa
caaggtgttggttctagttctacagagccacttctggattcgagtggagccatttccgct
gatatggaggatgacaaagacgtgctagaggaaagagacagggtgatttcggggttgaca
gacaacaccatattctacttacagaacctcaggaaggtctatcctggttgcaaacatcac
ggcccaaaagtagctgtacagtctttgactttctcggtccaagcaggagaatgttttggc
ttcttagggacgaatggagctgggaagactactaccttgtctatgttatctggagaagaa
accccaactagtggaactgcctttgtctttggcaaagacatagtaacgagccccaaagct
atccgtcagcatattggctactgcccccagtttgatgctttattcgactatttgactgtc
aaggagcaccttgaactttatgcaaggatcaaaggagtggttgatcatagaattgataat
gtggttacggaaaagttggttgagtttgacttgttgaaacattcttacaagccatcgttc
actcttagcggcggaaacaagcgcaaactatccgttgctattgcaatgattggagatcct
cccattgtcatcctcgatgaaccatctacaggtatggatcccgttgccaaaagattcatg
tgggatgtgatatcacgcttgtcgacaaggagtggaaagacagcggtcattctgactact
catagcatgaatgaagctcaagcgctttgcactaggatcgggatcatggttggaggccgc
ctaagatgcataggtagtccacaacacttaaaaacgcgcttcggaaaccaccttgagtta
gaggtcaaacccaacgaagtgagccatgtggacttggagaacttttgccaaatgattcag
caatggctgtttaacgttccttcacagcctagaagtttgcttagtgatctcgaagtttgt
atcggtgtctctgactctattactcctgatacggcttcatcatcagtaatcagtttgtca
ccagaaatggtacaaagcattgccaagtatcttggtaatgagcagagagtgagtactcta
gtaactcccatgcctgaggaagatgttcaaattgatgaacagttatccgaacagctgttt
cgagatggtggtattccactgccaatatttgcagagtggtggctagccaaagaaaagttt
gcagcattagattctttcatacaatcttcgtttccaggtgcagcattcaagagctgcaat
ggattgagcatcaaataccagttgccatttggagaaggaggattgtcacttgcagatgcc
tttggccaccttgaacgaaaccggattcggttgggggtagctgaatacagtataagtcaa
tccacgcttgagaccatattcaaccattttgcagctaactcctaa
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integrated database retrieval system
