Eutrema salsugineum (saltwater cress): EUTSA_v10016151mg
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Entry
EUTSA_v10016151mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
eus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10016151mg
03450 Non-homologous end-joining
EUTSA_v10016151mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10016151mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10016151mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
EUTSA_v10016151mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
EUTSA_v10016151mg
BRCA1-C complex
EUTSA_v10016151mg
NHEJ (non-homologous end-joining)
MRX complex
EUTSA_v10016151mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
Rad50_zn_hook
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18028077
NCBI-ProteinID:
XP_006410332
UniProt:
V4LMJ5
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR
SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQERTESSKA
QMSELESSIQKVDAEVHNKEMMLKELRKLQDQVSRKTAERSTLFKEQQRQYAALPEENED
TIEELKEWKSKFEERIALLETKIRKMEREMDDTATTISSLHNAKTNYMLEISKLQTEAET
QMLLKNERDSTIQKIYSHHNLGNVPKTPFSTEVVLNLTNRIKSRLGEFEMDLLDNKKSSE
TALSTAWNCYMDANDRWKSIEAQKRAKDEIKTGISKRIEEKKIERDSFEFEISNVDVKQI
DEREKHVQADLERKTKQKSESGFESKIAEKQQQIFTMEHKIKALNRERDVMAGDAEDRVK
LSLKKTELENLRRKHKKILDECKDKIRGVLKGRLPPEKDLKKEIVQALRSIEREYDDLSL
KSRESEKEVNMLQVKIQDVNNSLSKHHKDTESRKRYIESKLQALKQESFTIDAYPRLLES
AKDKRDEQKSKYSVANGLRQMFEPFEKIAREHHFCPCCERSFSTDEEDNFVKKQRITASN
TGDRLKVLAAESSNADSIFQQLDKLRSVFEEYSKLTNEAIPLTEKSLQEYTEELEQKSQA
FDDVLVILAQIKTDKDSVEALVHPLETADRLFQEIVSYQKQIEDLEYKLDFRGLGVKTMQ
EIQSELSILQSSKDKLHDELEKLRDEQICMERDISCLQARWHALREDKAKAANLLRDVTK
AEEDLERLAEEKSQLDLDVKYLTESLGPLSKKKEQLLSDYNDIKAKRNQEYEELAEKKRN
YQQEVEALLKASSKINEYHDLKKGERLIDIQEKQRVSESQLQSSEARKIEIAAELNKSKD
LMRNQDQLRRNIEDNLNYRTTKAEVEKLTREIESLEERILEIGGIPAVEAELVKISRERE
RLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY
NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQT
GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL
RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggtcgataaaatgctgatcaagggtatcagaagcttcgacccggaaaataag
aacgttatcactttcttcaggcctttaaccctaatcgtcggtgccaacggagccggaaaa
actacgattatagagtgtttgaaggtatcatgcacgggagagttgccccctaacgcgagg
tctggtcacagcttcattcatgaccctaaggttgctggggaaacggagacaaaagcacag
attaagttgcgattcaagacagctgcagggaaggatgtggtatgtataagatcatttcaa
ttgacacaaaaggcttcaaagatggagtacaaggcaatcgagagtgtgcttcaaaccatt
aatcctcacactggagagaaagtatgtctcagctacagatgcgctgacatggatagggag
ataccagctttgatgggcgtatcaaaagctattttagaaaacgtcatatttgtgcaccaa
gacgagtctaactggccactgcaagatccttctactttgaaaaagaagtttgatgacatt
ttctcagccaccagatacacaaaggcgttggaggttattaagaaacttcacaaagatcaa
gctcaggagataaaaacgtataagttgaagttggaaaatctgcagacgttgaaagatgca
gcttataagcttcgtgagagcattgctcaagatcaagaaagaacagagtcttcaaaagct
cagatgtcggaactggaaagcagcattcagaaagtggatgctgaagttcataacaaggaa
atgatgttaaaagaattgagaaagctacaggaccaagtttcaagaaaaactgccgaaagg
agcaccttatttaaggaacagcagagacagtatgcagcattacctgaggaaaatgaagat
actattgaagaactgaaagaatggaaaagcaagtttgaagaaagaattgctcttttggag
acaaaaattcgaaagatggagagagaaatggatgacacagccactacaatttcttctctt
cacaatgcaaaaaccaactatatgctggagatcagcaagctacaaacagaagctgaaact
caaatgctgctgaagaatgaaagagattctaccatccagaaaatttattcccatcacaat
ttgggaaatgttcctaaaactcctttcagtactgaggtagttttgaatctcacaaatcga
ataaagtcaaggcttggtgaatttgagatggacttgcttgataataagaaatcaagtgaa
actgccctaagtacggcttggaattgctatatggatgctaatgaccgttggaaaagcatc
gaagctcagaaacgagctaaagatgaaatcaagacaggcatatcaaaacgcatagaagag
aaaaaaattgagcgtgattcatttgaattcgaaatatccaatgtggatgttaaacaaatt
gatgaacgagaaaaacacgtgcaagctgaccttgagagaaagacaaaacaaaaatctgaa
agtggatttgaatccaaaatagcagagaaacagcagcaaatattcaccatggagcataaa
atcaaggctctgaatagagaaagagacgttatggctggtgacgctgaggatagagtgaaa
ttgtctttgaagaaaacagaactggagaatcttaggaggaaacacaaaaagatattagat
gagtgcaaggataaaattcgaggggtgctgaaggggagattgccacccgagaaggacttg
aagaaggaaatagttcaagctctgaggtcaattgaaagggaatatgatgacctaagcttg
aagtcccgagaatcagaaaaggaggtcaatatgttgcaggtgaagatacaagatgtaaac
aatagcctgtccaagcatcacaaggatacagaatcaagaaagcgatacattgagtccaag
cttcaagccttaaaacaggaatcatttaccattgatgcttatcccagattgctggagtca
gctaaggacaaaagagacgagcagaaaagcaaatatagcgtggcaaatggtttgcgccag
atgtttgaaccatttgagaagatagctcgtgaacatcatttttgtccttgctgcgagcgc
tctttttcaactgacgaagaggataacttcgttaagaagcaaaggattacagcttcaaat
acgggggaccgtctcaaagtattagcagcagagtcttcaaacgctgactctatctttcag
cagctggacaaacttcgctcagtttttgaagagtattcgaaactaactaatgaagctatt
cctctcactgagaaatccttgcaagagtatacagaagagctggaacagaagtctcaagcc
tttgatgatgtattggtaatcttagcacagattaaaactgacaaagactcagttgaagca
ctggtgcatcccctggaaactgctgataggctcttccaggaaattgtatcctaccaaaag
caaattgaagatctcgaatataaacttgatttcaggggtcttggggttaaaactatgcaa
gaaatccaatcagaattaagtatcctccaaagcagcaaggataaattgcacgatgagctg
gagaaattaagggatgagcagatttgtatggaacgtgatatatcatgcctccaggccaga
tggcatgcactaagagaggataaggctaaggcagctaatttgttacgcgacgttacaaag
gcagaagaagacctagagcgtttagctgaggagaaaagtcaacttgacctagatgtgaag
tatttgaccgagtctctgggccctttatccaagaaaaaagagcagttactgagtgactac
aatgatattaaagctaaacgtaatcaagagtatgaagaactggctgagaaaaagagaaac
taccagcaagaagttgaggcattacttaaggccagttctaagattaatgagtatcatgat
ctgaagaaaggagagcggttaattgatattcaagaaaagcagcgggtatctgaatcccag
cttcagagctctgaagctagaaagattgaaattgcagctgaactgaacaaaagtaaagac
ttgatgcggaatcaagatcaactgagaagaaacatagaggataacttgaactaccggaca
acgaaagcagaagttgaaaagctcacacgtgaaattgaatcattggaagaaaggatcttg
gaaattggtggaatacccgcagttgaagctgaacttgtaaaaatatcgcgggaaagggaa
agacttctttcagagttgaaccgatgtcgtggaaccgtgtctgtctacgagagcagtatt
tcaaagaacagagtggagctaaaacaagcgcaatacaaggacatagataagcggcacttc
gatcaactaatccagctaaagacaactgaaatggcaaataaagacttggatagatactac
aatgcccttgacaaagccctgatgcgcttccacacaatgaaaatggaggaaataaataag
attattagggaattgtggcagcagacatacagaggtcaagatatagattacataagaata
cattcagattccgagggtgcaggcactcggtcttacagctacaaggttcttatgcagact
ggtgatacagaacttgaaatgagaggaagatgcagcgcaggtcaaaaggttcttgcttca
ttgataataaggttggctttggccgagacattttgccttaactgtggaatattagccctt
gatgagccaactacaaacttggatgggcccaattcagaatctcttgcaggagctcttctt
aggatcatggaggacagaaagggccaagagaatttccaactcatagtcattacccacgac
gaacgctttgctcaaatgatcggccaacggcaacatgctgaaaaatattaccgtgttgcg
aaagatgatatgcaacacagcataatagaggcccaagagatctttgattga
DBGET
integrated database retrieval system
