KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10016162mg
Entry
EUTSA_v10016162mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K23288  syndetin
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10016162mg
Membrane trafficking [BR:eus04131]
 Protein recycling
  Others
   EARP complex
    EUTSA_v10016162mg
SSDB
Motif
Pfam: Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 18027439
NCBI-ProteinID: XP_006409804
UniProt: V4M871
LinkDB
Position
Unknown
AA seq 1005 aa
MQPNLFPFGTVLGNPFLFNGGDLSELGAAGGFESSRVFFLLPFLLSQGQGMDLSKVGEKF
LSSVKSATSLGLLPSSSSSSSSFSDRPEIPARAAAAAAVARALAGLPSDQRLSISSSATE
LSSIYGNRPPPQEVEELEEGFYEEDFDPVKHILENVPDDQSELAYFEKQATLKLVQLDRV
AENLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHTHS
KKKQALLDMLPILTDLRHARVMQSTLEDLAEEGNYCKAFQVLSEYLQLLDSLSEFSAIQE
MTRGVEVWLGRTLHKLDSLLLGVCQEFKEDSYLMVLDAYALIGDVSGLAEKIQSFFMQEV
ISETHSVLKTIVGEDNSAGTQFSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEI
MSFAPETKVESLTSPSPATTQKIDSVPNSSCDPQDGDLSSAVSSGSIPSCAISAEKSDGS
GTSSSVQQASNNTVDESRDSSGDSPWYYLRKESAAFVSETLQRGRRNLWQLTTSRVSVLL
SSPAASSTSIHQFLKNYEDLSVFILAGEAFCGFEVIDFREKLKGVCENYFTAFHRQSMHA
LKMVLEKETWTKLSPDTVQAINFAGLVGDGAPLIISSRSGSGSSRFPRSNKSNDSIDPSG
NRSGFSYWLKIGNPFSAKLTYYREDQDYSSVNGAASEDFEGNDNMHDDVVNPKKRDNRRS
NGGSPVSGDENEDLHADYIDEDSQLPRRSFTRNISRSSSNFSSSDDFTAQTGSSLCLLRS
MDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFQVFGQENTNSGGKGVADSFNHRLKSC
LSRISQECEQWIKPQLSPSSSLGFSNTVHSLADVTPASPLNTTTGHVSGISFSLKERCAA
VDTVSLVARILHKSKAHLQSMLMSRNGSLVENFFGQLVGSVPDLTEHLHRTTARILLHVN
GYVDRIASSKWEVKELGVEHNGFVASSICYPICPFEICTRKFKKS
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgcagcctaatctgttcccattcggcacagttttgggtaatccttttctcttcaatggc
ggcgatctaagcgaactcggtgctgctggtggcttcgagagctctagggttttcttctta
ctccctttcttattatcccaaggccaagggatggatttatccaaggttggcgagaaattc
ctcagctctgttaaatccgctacatcgcttggactcttaccttcttcttcttcttcttct
tcttctttctctgatcgtcctgagattccggcacgtgctgcagctgcggctgctgttgct
cgtgctttagctggacttccttctgatcagagattaagtatatcttcttctgctactgag
cttagctcaatatatggaaacagacctcctcctcaagaagttgaagagcttgaagaaggg
ttctatgaggaggattttgatccagtaaagcatattttggagaatgtgccagatgatcaa
agtgagctagcttatttcgagaagcaggcaacactgaagttggtacagctggatagagtg
gcagaaaatctgtctcatcatgttatggagcatcatgaagtaatggtgaaggggatgaat
ttggttagagaactggaaaaagatttgaagattgccaatgtcatctgcaagaatggaaga
cgaaatttgacttcatctatgaatgaggcttcaagagatcttattgtacacactcattcc
aagaagaaacaagctcttttggacatgcttcctatactaaccgatcttcgccatgcaaga
gtaatgcagtcaactcttgaagaccttgctgaagaaggaaactattgcaaggcatttcaa
gttctatctgagtatttgcagctgcttgatagtctatctgagttctcagcaatccaagag
atgacccgtggtgttgaggtttggttaggaagaactcttcataagctggattcactcttg
ttgggcgtttgccaggagttcaaagaagatagttatttaatggtacttgacgcttatgca
ctgattggtgatgtctctggtctggccgagaagatacaaagcttctttatgcaggaagtt
atctcagaaacccactcagtgcttaagaccattgttggggaggataacagtgctggcacc
caatttagtagacttacatacagcgatctatgtcttcagacgccagaatccaagtttagg
caatgtcttttgagaacactagctgtgctgtttcagttaatatattcataccatgagata
atgagtttcgcgccagaaacgaaggtagaaagtttgacttcaccaagtcctgcaacaact
caaaagattgattcagtgccaaacagttcatgcgacccacaggatggtgatctttcttca
gctgtgagttcgggaagcataccttcttgtgccatttctgcggaaaagtctgatggaagt
ggaacatccagttctgtgcagcaggcgtctaataatacagtagatgagtctagggattct
agtggcgattcaccatggtactatctacggaaagagagtgctgcttttgtctcagaaact
ctgcagagaggacgcagaaatctttggcaacttacaacaagccgtgtgtcagttttgcta
tcttctccagctgcttcttcaacaagtatacatcagttcctgaaaaattatgaagacttg
agcgtctttatccttgccggggaagcattctgtggatttgaagttattgattttagggag
aagctaaagggtgtatgtgaaaattatttcactgcatttcataggcaaagcatgcatgcg
cttaaaatggtcctggagaaggagacatggacgaaattgtcacctgataccgtacaagct
attaactttgctggtcttgtgggggatggggctcccctaattatatcatcccgcagtggc
tctggttcttccagatttcctcgctctaataagtcaaatgactcaattgatcccagtggg
aacaggagtggattttcatattggctgaaaattggaaaccctttctctgcaaagttaact
tattatagagaagatcaagattactcttcagtcaatggagctgcttctgaggattttgaa
gggaatgataatatgcacgatgatgtcgtgaatcccaagaaaagagataataggcgcagt
aatggaggtagtcctgtttcaggagatgaaaacgaagaccttcacgctgactatattgat
gaggatagtcagcttccaagacgaagttttactcgcaatatatcaaggagttcttcaaat
ttcagtagtagtgatgatttcacagctcaaacaggatcgtccctttgtcttctaaggtca
atggataagtacgcgaggcttatgcagaaactagaaattgttaatgttgaattcttcaag
ggaatatgccaattgtttggggtcttcttctattttgtgtttcaagtatttggtcaagaa
aatacaaattcaggtggaaaaggagttgcggactcttttaatcatcgtttgaaaagctgc
ttatcccggatatcacaagagtgtgagcagtggataaaacctcagttatcaccatcttct
tcacttggcttttccaacacagttcatagtcttgcagacgttactccagcaagtccctta
aatacaacaactggtcacgtatcaggcatatcttttagcctcaaggaaagatgtgctgca
gtggacactgtttctcttgtggctcggatattgcataaatcaaaggctcatctccaatca
atgcttatgtcaagaaatggctctctggttgaaaacttctttggtcaattggttggttcc
gtacctgatctgacagagcacttacataggacaactgcgaggatactgctgcatgttaac
ggatatgtagaccggattgctagctctaaatgggaagtcaaggagcttggtgtagagcac
aatgggtttgttgcttcgtcaatctgttaccccatttgcccttttgaaatatgtacccgc
aagttcaaaaaatcatga

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