Eutrema salsugineum (saltwater cress): EUTSA_v10016162mg
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Entry
EUTSA_v10016162mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K23288
syndetin
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10016162mg
Membrane trafficking [BR:
eus04131
]
Protein recycling
Others
EARP complex
EUTSA_v10016162mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
18027439
NCBI-ProteinID:
XP_006409804
UniProt:
V4M871
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MQPNLFPFGTVLGNPFLFNGGDLSELGAAGGFESSRVFFLLPFLLSQGQGMDLSKVGEKF
LSSVKSATSLGLLPSSSSSSSSFSDRPEIPARAAAAAAVARALAGLPSDQRLSISSSATE
LSSIYGNRPPPQEVEELEEGFYEEDFDPVKHILENVPDDQSELAYFEKQATLKLVQLDRV
AENLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHTHS
KKKQALLDMLPILTDLRHARVMQSTLEDLAEEGNYCKAFQVLSEYLQLLDSLSEFSAIQE
MTRGVEVWLGRTLHKLDSLLLGVCQEFKEDSYLMVLDAYALIGDVSGLAEKIQSFFMQEV
ISETHSVLKTIVGEDNSAGTQFSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEI
MSFAPETKVESLTSPSPATTQKIDSVPNSSCDPQDGDLSSAVSSGSIPSCAISAEKSDGS
GTSSSVQQASNNTVDESRDSSGDSPWYYLRKESAAFVSETLQRGRRNLWQLTTSRVSVLL
SSPAASSTSIHQFLKNYEDLSVFILAGEAFCGFEVIDFREKLKGVCENYFTAFHRQSMHA
LKMVLEKETWTKLSPDTVQAINFAGLVGDGAPLIISSRSGSGSSRFPRSNKSNDSIDPSG
NRSGFSYWLKIGNPFSAKLTYYREDQDYSSVNGAASEDFEGNDNMHDDVVNPKKRDNRRS
NGGSPVSGDENEDLHADYIDEDSQLPRRSFTRNISRSSSNFSSSDDFTAQTGSSLCLLRS
MDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFQVFGQENTNSGGKGVADSFNHRLKSC
LSRISQECEQWIKPQLSPSSSLGFSNTVHSLADVTPASPLNTTTGHVSGISFSLKERCAA
VDTVSLVARILHKSKAHLQSMLMSRNGSLVENFFGQLVGSVPDLTEHLHRTTARILLHVN
GYVDRIASSKWEVKELGVEHNGFVASSICYPICPFEICTRKFKKS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctgttcccattcggcacagttttgggtaatccttttctcttcaatggc
ggcgatctaagcgaactcggtgctgctggtggcttcgagagctctagggttttcttctta
ctccctttcttattatcccaaggccaagggatggatttatccaaggttggcgagaaattc
ctcagctctgttaaatccgctacatcgcttggactcttaccttcttcttcttcttcttct
tcttctttctctgatcgtcctgagattccggcacgtgctgcagctgcggctgctgttgct
cgtgctttagctggacttccttctgatcagagattaagtatatcttcttctgctactgag
cttagctcaatatatggaaacagacctcctcctcaagaagttgaagagcttgaagaaggg
ttctatgaggaggattttgatccagtaaagcatattttggagaatgtgccagatgatcaa
agtgagctagcttatttcgagaagcaggcaacactgaagttggtacagctggatagagtg
gcagaaaatctgtctcatcatgttatggagcatcatgaagtaatggtgaaggggatgaat
ttggttagagaactggaaaaagatttgaagattgccaatgtcatctgcaagaatggaaga
cgaaatttgacttcatctatgaatgaggcttcaagagatcttattgtacacactcattcc
aagaagaaacaagctcttttggacatgcttcctatactaaccgatcttcgccatgcaaga
gtaatgcagtcaactcttgaagaccttgctgaagaaggaaactattgcaaggcatttcaa
gttctatctgagtatttgcagctgcttgatagtctatctgagttctcagcaatccaagag
atgacccgtggtgttgaggtttggttaggaagaactcttcataagctggattcactcttg
ttgggcgtttgccaggagttcaaagaagatagttatttaatggtacttgacgcttatgca
ctgattggtgatgtctctggtctggccgagaagatacaaagcttctttatgcaggaagtt
atctcagaaacccactcagtgcttaagaccattgttggggaggataacagtgctggcacc
caatttagtagacttacatacagcgatctatgtcttcagacgccagaatccaagtttagg
caatgtcttttgagaacactagctgtgctgtttcagttaatatattcataccatgagata
atgagtttcgcgccagaaacgaaggtagaaagtttgacttcaccaagtcctgcaacaact
caaaagattgattcagtgccaaacagttcatgcgacccacaggatggtgatctttcttca
gctgtgagttcgggaagcataccttcttgtgccatttctgcggaaaagtctgatggaagt
ggaacatccagttctgtgcagcaggcgtctaataatacagtagatgagtctagggattct
agtggcgattcaccatggtactatctacggaaagagagtgctgcttttgtctcagaaact
ctgcagagaggacgcagaaatctttggcaacttacaacaagccgtgtgtcagttttgcta
tcttctccagctgcttcttcaacaagtatacatcagttcctgaaaaattatgaagacttg
agcgtctttatccttgccggggaagcattctgtggatttgaagttattgattttagggag
aagctaaagggtgtatgtgaaaattatttcactgcatttcataggcaaagcatgcatgcg
cttaaaatggtcctggagaaggagacatggacgaaattgtcacctgataccgtacaagct
attaactttgctggtcttgtgggggatggggctcccctaattatatcatcccgcagtggc
tctggttcttccagatttcctcgctctaataagtcaaatgactcaattgatcccagtggg
aacaggagtggattttcatattggctgaaaattggaaaccctttctctgcaaagttaact
tattatagagaagatcaagattactcttcagtcaatggagctgcttctgaggattttgaa
gggaatgataatatgcacgatgatgtcgtgaatcccaagaaaagagataataggcgcagt
aatggaggtagtcctgtttcaggagatgaaaacgaagaccttcacgctgactatattgat
gaggatagtcagcttccaagacgaagttttactcgcaatatatcaaggagttcttcaaat
ttcagtagtagtgatgatttcacagctcaaacaggatcgtccctttgtcttctaaggtca
atggataagtacgcgaggcttatgcagaaactagaaattgttaatgttgaattcttcaag
ggaatatgccaattgtttggggtcttcttctattttgtgtttcaagtatttggtcaagaa
aatacaaattcaggtggaaaaggagttgcggactcttttaatcatcgtttgaaaagctgc
ttatcccggatatcacaagagtgtgagcagtggataaaacctcagttatcaccatcttct
tcacttggcttttccaacacagttcatagtcttgcagacgttactccagcaagtccctta
aatacaacaactggtcacgtatcaggcatatcttttagcctcaaggaaagatgtgctgca
gtggacactgtttctcttgtggctcggatattgcataaatcaaaggctcatctccaatca
atgcttatgtcaagaaatggctctctggttgaaaacttctttggtcaattggttggttcc
gtacctgatctgacagagcacttacataggacaactgcgaggatactgctgcatgttaac
ggatatgtagaccggattgctagctctaaatgggaagtcaaggagcttggtgtagagcac
aatgggtttgttgcttcgtcaatctgttaccccatttgcccttttgaaatatgtacccgc
aagttcaaaaaatcatga
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