Eutrema salsugineum (saltwater cress): EUTSA_v10016179mg Help Entry EUTSA_v10016179mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03018   RNA degradation Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     EUTSA_v10016179mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:eus03019]     EUTSA_v10016179mg    03012 Translation factors [BR:eus03012]     EUTSA_v10016179mg Enzymes [BR:eus01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      EUTSA_v10016179mg Messenger RNA biogenesis [BR:eus03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      EUTSA_v10016179mg Translation factors [BR:eus03012]  Eukaryotic type   Initiation factors    Initiation associated factors     EUTSA_v10016179mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 nSTAND3 T2SSE ATPase NACHT ABC_tran Motif Other DBs NCBI-GeneID:  18027934 NCBI-ProteinID:  XP_006410762 UniProt:  V4LNS6 LinkDB All DBs Position Unknown AA seq 1004 aa AA seqDB search MPPHGPNSQGGRRGGGFSSGRGGGRRGGRGGGGGGGGRGGGGRGEQRWWDPVWRAERLRQ QQAEMEVLDENEWWNKIEQMKAGGEQELVIKRNFSRADQQTLSDMAYQMGLYFHAYCKGK ALVVSKVPLPDYRADLDERHGSTQKEIQMSTETEKKLGTLLKTTQESGSSSVSTSAFNDQ QDRTATLGLKRPDSASKSLDSHEKEKFSVALKERQEKLKATDSVKALQAFREKLPAFKMK KGFLNSVSENQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVA SRISAERGESLGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTSISHLLVDEI HERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNAPTMHIPGFTFPVAEL FLEDVLEKSRYSIKSSDSGNYQGNSRGRRRDSESKKDDLTTLFEDVDVNAHYKSYSSATR VSLEAWSGAQIDLDLVEATIEHICRREGGGAILVFLTGWDEISNLLEKIKGNSLLGDSSK FLVLPLHGSMPTVNQREIFDRPPPSKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD ALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQE LCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALDDMETLTPLGRHLCTLPV DPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRSFAGDSCSDHIA LVKAFEGYRDAKRGGNERDFCWHNFLSPVTLKMMEDMRNQFLDLLSDIGFVDKSRGPNPY NQYSHDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVHLFSLPY LVYSEKVKTTSVYIRDSTNISDYALLMFGGSLTPSQAGDGIEMLGGYLHFSASKNVLELI QRLRGEVDKLLNRKIEDPSLDITVEGKGVVSAVVELLRSRNIRY NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atgccccctcacggtcctaattctcagggtggtcgtcgaggcggaggtttttcctccggt cgcggtggaggtcgccgtggcggacgcggcggaggtggtggtggtggtggacgcggcgga ggcggacgtggggaacagcgatggtgggatccggtgtggagagctgagcgtttgcgccag caacaggctgagatggaagttcttgatgagaatgaatggtggaacaagattgagcaaatg aaagcaggaggagaacaagagttggtaataaagcgtaactttagccgggcagatcagcaa acactctctgatatggcttatcagatgggactttacttccatgcgtactgtaaagggaag gctcttgtagttagcaaagttccgttgccagattatcgggcggatcttgatgaacggcat ggatccactcagaaagagattcaaatgtctacagagacagagaaaaagcttggaactctt ttgaaaacaacacaagagtcagggtcttcaagtgtctctacttcagcatttaatgaccaa caggatcgcacagcgactcttggccttaaaagacctgattctgcttccaaatctttggat tctcatgagaaagaaaaatttagtgttgcactcaaggaaaggcaggaaaaactaaaggca actgacagtgtaaaggcacttcaagctttcagagaaaagctacctgctttcaaaatgaaa aaggggtttcttaactctgtttcagaaaatcaggtattggtagtttcaggagagaccggg tgtggcaaaacaacacaacttcctcaatttattttggaagaagagatatcatccctaaga ggtgctgattgcaacataatctgcacacaacctcgacgtatatctgccatatctgttgct tctcgtatatctgctgaaaggggtgaatcccttggtgaatctgtgggttatcagattcgt ctagaatcaaagcgttctgatcaaacaagattgctattttgcactactggtgttttactc cggcggctgattgaggatcctaatctaactagcataagccatttgcttgtggatgaaata cacgagagaggcatgaatgaggatttcctactaatcatactacgggatcttcttcctcgg cgcccagatttacgccttattctcatgagtgctacgattaatgctgacatgttctcaaca tattttgggaacgctccaaccatgcatattccggggttcacattccctgttgcagagcta ttcctagaagatgtactggagaaaagtcgctatagcattaagtcgtctgactcagggaat tatcaaggtaattcgagaggtagaagaagagactcagaatccaagaaagacgacctaact acactgtttgaggatgttgacgtcaatgctcactataaaagttatagctcggccacaaga gtttctcttgaagcatggtctggtgcacagattgatttggatctggttgaggcaacaatc gaacatatatgccgtcgtgaaggtggtggggcgattcttgtctttctcactggctgggat gagatttcgaatctgcttgaaaaaattaaagggaacagcttgcttggagattctagcaag ttcttagttcttcctctacatggttcaatgccgacggttaaccaacgtgaaatttttgac cgtccacctcctagcaagcggaaaatagttttggctacaaacattgctgagagtagtatt acaattgatgatgttgtgtatgttgtggattgcggtaaagcgaaggaaactagctatgat gctttgaacaaggtggcatgtctattgccatcatggatttcaaaggcttcagctcaccag agacgaggtcgtgcaggacgtgtccaagctggagtttgttataggttgtatccaaaagtt atctatgatgctttcccacagtatcagttaccagaaatcatacggactccattgcaagag ttatgcctgcacatcaaaagtttgcaggttggatccataggatcattcttggccaaggca cttcagccgccagatgctcttgctgttgagaatgctattgaacttctcaaaacaattggg gctttagatgacatggaaacgcttacaccccttggtcgccatctttgcactttacccgta gatccaaatataggaaagatgcttttgattggagctatcttccagtgcgtcaatcctgcc ctgacaatcgccgcggctcttgcatatcggagcccatttgtcttaccgttaaacagaaaa gaggaagctgatgaagccaaaagatcttttgctggtgattcctgcagtgatcacattgct cttgttaaggcatttgagggatatcgggatgcaaagcgtggtggaaacgaaagagatttt tgttggcacaacttcctttcccctgtaaccctaaagatgatggaggatatgagaaaccag tttcttgatcttctttcagatataggattcgtagacaaatcaagggggccaaatccatac aaccaatacagccacgatatggagatgataagcgcggtgctgtgtgcggggctgtaccca aatgttgtgcaatgcaaaagaagagggaagcgcactgcgttctacactaaagagttgggt aaagttgatattcaccctggatctgtcaacgcaagagtgcatctcttctcgttgccgtac ttggtgtacagcgaaaaggtgaagacgacaagtgtttatatccgggactcaacaaacata tcagattacgcactgcttatgtttggtggcagtcttaccccaagccaagcaggggatggt atagagatgttgggagggtatctccatttctcagcctcgaagaacgtattggaactgata cagagattgcggggagaggtggacaaattgctgaataggaagatagaagatccaagtttg gacataactgtggaggggaaaggagtggtttcagctgtggtggagttgctgcgtagccga aacatcaggtattaa

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