Eutrema salsugineum (saltwater cress): EUTSA_v10016181mg
Help
Entry
EUTSA_v10016181mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10016181mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10016181mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10016181mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EUTSA_v10016181mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
EUTSA_v10016181mg
microRNA pathway
RISC loading complex
EUTSA_v10016181mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18027438
NCBI-ProteinID:
XP_006409803
UniProt:
V4NWM1
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MSSRGGYGGAGRGGGRGRSDQRPEQSSGSVAWPGLQSSGGRGGSGSGGRGRGNAGRGNTP
VVTGDRSASSSSAPSGVAPGAGVVASSSATSVREKPKVSKSDSGSELGQELAETVQISPE
TTLSPASSKALTHVVRPGFGQAGKKLTIRANHFLVQVADRDLYHYDVSISPEVISKKVNR
DVMTTLVRTYGESHLAQKTPAYDGRKSIYTAGPLPFESKEFDVDLNDKKVAGSSSRRERK
FKVAIKLASRPDLFQLQQFLRRKQRDVPYEAIQVLDVVLRDTPSEKYVTVGRSFFDPGLG
KKGPLGDGVEYWGGYFQSLRLTQMGLSLNIDVSARSFYEPILVTDFIIKYLNLRDFSRPL
NDSDRVKVKKALKSLRVELAHFDFARSSKISGISSCPISQLSFTLEDNSQKTVVQYFAEK
YNYRVKYPCLPAIQSGSDSKPSYLPMELCQIAEGQRYTKKLNERQVTALLRATCQRPPER
ENAIKGMVKKNGYNEIKLVSKEFGMSVTDQLASVEARVLPPPMLKYHESGKEKMVNPRLG
QWNMIDKKMINGARVATWTCVSFSTRLDRGLTQEFYKQLTGMCVSKGMQINPNPVMPPVF
STPQKIEEALRDIHKRLPPPPSPGAPGLQLLIVILPDLSGSYGKIKRICETELGIVSQCC
QPNQARKLSPQYMENVALKINVKSGGRNTVLDDAIRRRIPLITDRPTIIMGADVTHPQPG
EDSSPSIAAVVASMDWPEITKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHL
MAFRKATGQKPQRIIFFRDGVSEGQFNQVLLHETHAIHKATNSLEEGYLPRITFVIVQKR
HHTRLFPAQHGNRETTDRSGNILPGTVVDTKICHPTEFDFYLNSHSGIQGTSRPAHYHVL
YDDNGFTADALQMLTNNLCYTFARCTRSVSIVPPAYYAHLAAFRARYYMESEFSDGGSSK
TRNTTTSTSTFVSHLPAIKDNVKDVMFYC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtggtggctacggtggtgctggtcgcggcggaggaaggggtcggtctgac
cagagaccggagcagtcatctggttccgttgcgtggccgggactgcagagctccggtggc
cgtggaggttcgggttctggcgggagaggccgtggaaacgccggacggggaaatacaccc
gtcgttactggagatcggagcgcgagttcttcgtctgctccgtcgggtgttgctcccggt
gccggtgtcgttgcttcgtcttcagcgacgtccgtacgggagaaacctaaggtctcgaag
tctgactctggttcggaacttggtcaggagttagcggagacggtccagatttctccggag
acgacactttctccggcgtcctcgaaggcgttgacgcacgtggtccggcctgggtttggt
caagcggggaagaaattgacgattcgcgcgaatcatttcctcgttcaagttgcggataga
gatctctatcactacgatgtctcaatcagtcctgaggtgatatcaaagaaggtgaacaga
gacgtgatgacaactctggtgcgtacctatggagaatcacacttagcacagaagactcct
gcctatgatgggaggaagagtatatacactgctgggccactgccctttgagtctaaagag
ttcgatgttgatttaaatgacaagaaagttgctggttcttcttctaggagggaaaggaaa
tttaaggttgctataaagctggcgtcgagacctgacctttttcagttgcagcaatttctc
cgccggaaacaaagagatgttccatacgaggctattcaagtccttgatgttgttctcagg
gatacgccctctgagaagtatgtcactgttgggaggtcttttttcgaccctggtttggga
aagaagggtccgcttggtgatggtgttgagtactggggtggatatttccagtctctcaga
ctcacacaaatgggactgtctcttaacatcgatgtgtcagctagatctttctatgaaccg
attcttgtcactgacttcatcataaaatatctgaatctgagagactttagcaggccactg
aatgactcagatcgagtcaaggtgaagaaagctttgaagagcttaagagttgaattggca
cattttgacttcgcaagaagttccaagatcagtgggatttccagctgtcccatcagtcag
ctaagtttcactttggaggacaattcccaaaaaactgtggtacagtattttgctgaaaaa
tataactacagggtgaaatacccttgtctacctgctattcaatcagggagtgactcaaag
ccttcgtatctgccgatggaactctgtcaaatagctgaaggccagcgatacaccaaaaag
ctcaatgagaggcaggtgactgcgttgctaagagctacctgccaacgacctccggagaga
gagaatgcgatcaaagggatggtcaagaagaatggatataacgagattaagcttgtgagc
aaggagtttgggatgtccgtcactgatcagctagcatcagttgaggctcgtgtgcttcct
cctccaatgttaaaataccatgaaagtggtaaagaaaaaatggtgaatccaaggctagga
cagtggaacatgatcgacaagaaaatgatcaatggagcaagggttgctacctggacttgt
gttagtttctcgactcggcttgatcgaggtttgacccaagagttctacaaacagttaact
ggcatgtgcgtgagcaaaggaatgcaaataaatccaaatcctgttatgccacccgtcttt
tctacacctcaaaaaatcgaggaagcacttcgagatatccacaaaaggttaccaccacca
ccatcacctggcgctcctggtctccaacttttgattgtaatcttgcctgatctgtctgga
tcttatggaaagatcaaaaggatttgtgaaacggagctagggatagtctctcagtgttgt
caaccaaaccaagctcgtaaactcagcccgcagtacatggaaaatgtcgctttgaagatc
aatgtcaagtctggtggacgtaatacagttcttgacgatgctattagaagaagaattcca
ctgattacggaccgcccgaccataatcatgggtgcagacgtgactcacccccaacctgga
gaggactcgagtccttcgattgctgcggtggttgcttcaatggactggcctgagataacc
aaataccgaggactggtttctgctcaggctcatagggaagaaatcatccaggacctgtat
aagctggtgcaggatcctcagcgagggttagtccattctggtttgataagggagcatctc
atggctttcaggaaggctactggtcaaaaacctcaaaggatcatcttcttccgcgacgga
gtcagcgaaggacagtttaaccaggttctgctccacgagacacatgctattcacaaagca
actaactctctcgaagaaggatatcttccccgtatcacgtttgtgattgtccagaaaaga
caccacactcgtttgtttcctgctcagcatgggaaccgtgaaacgactgataggagtggc
aatatccttccaggcacggtcgttgacaccaaaatctgtcacccgacagagtttgacttc
tacttgaacagccactctggtattcagggaacaagcagacctgcacattaccatgtcctt
tacgatgataacggtttcactgctgatgccttgcaaatgcttaccaacaacctctgctac
acgtttgcgaggtgcacaagatctgtctcgattgtgccaccggcttactatgcgcacttg
gctgcattcagggctcgctattacatggagagtgagttttctgatggaggttcgagcaag
accaggaacacgaccacgagcacaagtacattcgtctcgcatcttccagcaatcaaagat
aacgtcaaggacgttatgttctactgctga
DBGET
integrated database retrieval system
