Eutrema salsugineum (saltwater cress): EUTSA_v10016231mg
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Entry
EUTSA_v10016231mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10016231mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10016231mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10016231mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
18026482
NCBI-ProteinID:
XP_006411426
UniProt:
V4M956
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEEVFPAEATSVEEYLQQVHEMAMVSAIQEG
QKDNVRSFNDYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNMIDTSREANAGQLVPVASS
PRVSSTPGKELVALASIPIHEKKAYVYGEVVKKLNTSRERGLPFRPAMSFKDAYESLGVE
VTRGKSVNMQKIWQLVQAITGEDSAVRQGVSKRMSLAIGARRHLQRGHEKHIMDTIQSHP
TQASLGGSVGNLQRIRAFLRIRLKEYGILDFDSPDARRQPPVDTTWQQIYFCLRTGYYEE
ARDIARSTRSSQQFAPLLTEWITTDGMVAAETAAIASEECEKMLRMGDRLGRTAYDKKKL
LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLSCIRDVAGGSSSVVLNDGLAPYSLD
DLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAIMHLSKEAGDGGYNIDAVHIAIS
LVDHSVLSEGSGTGHKLSVMDANAEASSMIRQYGSMFLHHGDLQMTVEYYAQAAVTVGGG
QLAWSGRSNVDQQRQRNLMLKQLLTEILLREGGIYFLLGARGSGEEGQLGRFFPDSRLRQ
QFLIEAAHQCQDAGLYDKSIEIQKRVGAFSAALETINRCLSEAICSLARGRLDGESRTSG
LILAGNDILQTYKYYPEVSLQERERVLEQETILRELEAILSIHKLGRQGNHLDALREIAK
LPFLQLDPRVPDATTDIFQSASPYFQTCVPDLLKVAITCLDNVPDTDGSIRAMRSKIAGF
LASNTHRNWPRDLYEKVARSF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagagatgagtggttggactgatcttctccattcttcttcgaagctt
ttggagcaagctgctccttcgtctcagtttcctcctcttcagagaaatttagatcaattg
gaagcgttatcgaagaagctcaaagctaaaaccctaaggaatgaagctccttctcagtct
attgctgccactagactactcgcacgggagggaatcaatgcagagcaactagctcgtgat
ctaaaatcttttgaattgaagacaacatttgaggaagtgttccctgctgaggctacaagc
gtcgaagaatacctgcaacaggttcatgaaatggctatggtatcagctatacaagaaggc
caaaaggataatgttcgaagctttaatgattacatgatgaaagtgctggaggaggattgg
agaaaagaaaaacgtgacttccttcagagccttagcaggatatcaatgttacctaagacg
aatatgattgatacaagcagagaggctaatgctggtcaactagtgccggtggcttcgagt
cctcgagtatcctcaacaccaggcaaagaacttgtggctctggctagcatacccattcat
gagaaaaaagcatatgtctatggagaggttgtgaagaaacttaacacttcaagagaacga
ggcttgccatttagacctgcaatgagttttaaggacgcttatgaatctcttggtgttgag
gtaactcgtggaaagtcagtcaacatgcagaaaatatggcagcttgttcaggcaataaca
ggtgaagactcagcagttcgacagggtgtttcgaagaggatgtccctcgctataggtgca
agacgtcatttacaacgtgggcatgagaaacatataatggacacaattcaaagtcaccct
acacaagcttctctaggtggatctgttggaaatttgcaaagaattcgtgctttccttcgg
attcgtttgaaagaatatggaattttagattttgattcacctgatgcccgtaggcagcct
cctgttgatacgacttggcaacagatatacttttgcttacgaaccgggtattacgaggaa
gctagggatattgctcgatcaactcggtcatctcagcaatttgcaccactgcttacagag
tggattaccacagatggtatggtggctgcagagactgcagctattgcatcagaagaatgt
gagaaaatgctaagaatgggtgaccggttgggtagaaccgcatatgacaagaagaaactc
ctactctacaccatcatctctggttcccgcaggcaaattgagcgcatactgagggatctg
tcgacactcttcaacacaattgaggatttcttatggttcaaattatcatgcatcagagac
gttgctggtggatcttcatctgtggtcttgaatgatggcctcgcgccgtacagtttagat
gatcttcaggcttatctcaataaatttgagccttcatactacacgaagaacggaaaagac
cccttggtatatccatatgttttgcttctcagcattcagttgcttcccgctatcatgcac
ttatccaaagaggcaggagacggagggtataatattgatgctgttcatatagctatttct
ctagtggaccattccgttttatctgaaggctctgggactggccacaaactaagcgtgatg
gatgctaatgctgaggcatctagcatgattaggcaatatgggtcaatgtttttgcatcac
ggggatctccaaatgacggtagagtattatgcacaagctgctgttactgtaggcggggga
caactagcttggtctggaagaagtaatgtggatcaacagaggcagagaaacttaatgctg
aagcagctactgactgagattcttctgcgagagggtggtatttactttttgcttggggca
agaggttctggtgaagaaggtcagcttggaaggtttttccctgattctagattgagacaa
cagttcttgattgaagctgcacatcaatgtcaagatgctggattatatgacaaatccatc
gaaatacagaagagagtgggtgcattttcggcggccttggagactataaacaggtgtcta
tctgaagccatttgttctcttgcccgtggaaggttggatggtgaaagccgaacatcaggg
cttatcctcgcgggaaacgatattcttcagacttacaaatattaccctgaagtcagtctt
caggaaagagagcgagtgctggaacaagaaaccatactaagagagctcgaggcaatacta
tcgatccacaagttaggtagacaaggcaatcatctggatgctttgagggaaattgcgaaa
cttccatttcttcaacttgatccaagagtgcccgatgcaaccactgatatatttcagagc
gcatctccatacttccagacatgtgtcccggacctgctcaaagttgcgataacttgtctg
gacaatgtacctgacactgatggatcgatccgtgccatgagatcaaagattgctgggttt
cttgcaagcaacacgcaccggaactggcctcgtgacttgtacgagaaggtggctcgaagc
ttttga
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