Eutrema salsugineum (saltwater cress): EUTSA_v10016232mg
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Entry
EUTSA_v10016232mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EUTSA_v10016232mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10016232mg
Membrane trafficking [BR:
eus04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EUTSA_v10016232mg
Hops complex
EUTSA_v10016232mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
ANAPC4_WD40
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
18026776
NCBI-ProteinID:
XP_006411003
UniProt:
V4NZN6
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MANVSVAAEWQLLYNRYYRKPEIYQMRWKHVDLSRNKVACASFGGPIAVIRDDSKIVQLY
AESALRKLRIFNSAGILLSETVWKHPGGRLIGMSWSDDQTLICIVQDGTIYRYNIHAELI
EPNMTMGKECFEQNVVECVFWGNGVVCLTEGGQLFCISDFKTMKPYKLADVPGLTEDDLL
QPTCLAVREPQYTMSGNVEVLVAVGDDIFVVDEDEAQTIRFDEPSVEDSEMQNDDYGNLI
GPVQKMIVSPNGKFLTLFTHDGRIVVVGMETKHIAIDYSCESALPPQQMAWCGMDSVLLY
WDEDLMMVGPLGEPVHYFYDEPVILIPECDGVRILSNTSLEFLQRVPDSTESIFKIGSTS
PAALLYDALDHFDRRSAKADENLRLIRSSLSEAVESCIDAAGHEFDVTRQRALLRAASYG
QAFSCNFQRDRVQETCRTLRVLNAVRDPNIGIPLSIQQYKLLTAMVLISRLINAHSHLLA
LRISEYLGMNKEVVIMHWACAKITASQSTPDAHLLEILLDKLQLCKGISYAAVATHADNC
GRRKLAAMLVEHEPRSTKQVPLLLSIGEEDTALVKATESGDTDLVYLVIFHIWQKRPPLE
FFAMIQGRVLARDLFVAYARCHKHEFLKDFFLSTGQIHEVAFLLWKESWDMGKNPMASKG
SPLHGPRIKLIEKASNLFSQTKEHTFESKAAEEHAKLLRIQHELEASTKQAIFVDSSIND
TIRTCIVLRNNRAAAKVKSEFKVSDKRWYFLKAFALATIKDWEALEKFSKEKRPPTGFRP
FVEACIDADEKAEALKYIPKLSDLGERGEAYARIGMAKEAADAAAQANDGGELLERFRKT
FSQNAIFDTLKMPFQGVS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgtctgttgctgcggaatggcaacttctctataatcgatattacaggaag
cctgagatataccaaatgagatggaaacatgtagatttgagtcgcaacaaggtggcttgt
gcctcatttggtgggccaattgcagtcattcgagatgactcgaagattgtccaactctat
gctgaatctgctctaagaaagctccgcattttcaactcagcaggtatacttctctctgag
acggtctggaaacaccctggaggacgcctcattggaatgtcctggtctgatgatcagaca
ctaatctgcatcgtccaagacggcactatttatcgttacaacatccacgctgagctcatc
gagcccaatatgacaatgggaaaggagtgctttgagcagaatgtggtggagtgtgtcttc
tggggaaatggtgttgtctgcttgacagaaggagggcagttattctgcatttccgatttc
aagacaatgaagccttataagttggctgatgtgccggggttaacagaagacgatctgctt
cagccaacttgcttggctgtgagggaacctcagtacacaatgtctgggaatgttgaggtg
ttggtagcagttggcgatgacatttttgttgtggatgaggacgaggcacaaactattagg
tttgatgagcctagtgttgaagactctgagatgcagaatgatgattatgggaatttgatt
ggacctgtgcagaagatgattgtatcacctaacgggaaatttctgacactcttcactcat
gatggccggattgttgttgttggcatggaaacaaaacatattgctattgactacagttgc
gagtcagcccttcctccgcagcaaatggcttggtgtggaatggatagtgtgctgctctat
tgggatgaggatttgatgatggtgggtcctttaggagaaccagttcactatttctatgat
gaacctgtaattctcatcccagaatgcgacggagtgaggatattatctaacacgagcctt
gaatttctgcaaagagtacctgattctaccgagtcaatctttaagattggaagcacatca
cctgcagctttgctgtatgatgctttggatcattttgacaggcgaagtgctaaggcagat
gaaaatttgagactaattcgttcatcgctgtctgaggctgttgaatcctgtattgatgct
gctggccatgaatttgatgtaactcgtcagagagccttgttacgagcggctagttatgga
caagcgttcagctgcaatttccagcgtgaccgtgtccaagagacttgtagaaccttacgg
gttttaaacgccgttcgtgatcctaatattggcatacctctgagcattcagcagtacaag
ttactgacagcaatggttttgattagtcgcctaattaatgctcattcccaccttcttgct
ctccggatatctgagtacttaggaatgaataaagaagtggtgataatgcactgggcgtgt
gcaaagataactgcttcacaatcaactccagatgctcatcttcttgaaattttacttgat
aagctccaactatgcaaaggaatatcttatgctgcagtggccactcatgctgataactgt
ggccgtcgaaagttagctgcaatgctagttgaacatgaaccacgctccacgaaacaggtt
cctcttttactaagtattggggaggaagacaccgctttagtgaaagcaactgagagtggt
gacacagacctggtttatctcgttatatttcatatatggcaaaagaggcctcctttggaa
ttctttgcgatgatccaaggcagagttttggctcgtgatttatttgtagcttatgcacgg
tgtcataaacatgaattcctgaaggatttcttcttatctacgggtcagattcatgaagta
gctttccttttatggaaagaatcatgggatatgggcaaaaacccaatggctagcaaagga
tctccgctgcacggtccgcggataaaactaatagagaaagccagtaaccttttctctcag
acaaaggagcacactttcgagtctaaggccgctgaggagcatgcaaaactcctgaggata
cagcatgagctagaagctagtacgaagcaggctatctttgttgattcaagcatcaatgat
actatacgtacatgtattgtcctgcgtaataatcgtgctgcagcaaaagtgaagtcagaa
ttcaaggtttctgataaaagatggtattttcttaaagcatttgctctggctacaatcaaa
gactgggaagcgctggagaagttttcaaaggaaaagagaccaccaacaggtttccgtcca
ttcgtggaggcatgcatcgatgcagatgagaaagcggaggctctaaaatacatccccaag
ctgtcagatcttggagaaagaggcgaggcttatgctcgtattggaatggcgaaagaagcg
gctgatgcagcggctcaggcaaatgatggaggagagttgttggagagattcaggaagacg
ttttcacagaatgctatttttgatacccttaaaatgcctttccaaggagtctcctag
DBGET
integrated database retrieval system