Eutrema salsugineum (saltwater cress): EUTSA_v10016293mg
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Entry
EUTSA_v10016293mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11578
protein transport protein DSL1/ZW10
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10016293mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10016293mg
Membrane trafficking [BR:
eus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
EUTSA_v10016293mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
EUTSA_v10016293mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zw10_middle
ZW10_C2
ZW10_C
Zw10_N
Dsl1_C
DUF3440
Motif
Other DBs
NCBI-GeneID:
18027596
NCBI-ProteinID:
XP_006410428
UniProt:
V4NY61
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MPEIDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHH
SEFSELFSTCQDTVSRTRLISDDLSDVLQLISDRPIDVEIRSVVDEINEKTKEVKLKRES
LDLVSAIVGICEALQETKEALKGGRFRFAAERIRELKVVLRIGEEEEEGEPVAYVLLRKE
WSDCFDEIQDVLAKFMENAVRFEVDSRKLRINYQLSVGETTGIALSTVLEAMEVIGMLDY
GLAKAADSIFKHVITPAVTHASTFVAVEDSSKTSGEITEAILKLDQSSDHKVEDVDGGAI
YTGIVKIVKFICSSLCFGNVTWIRSFGRLSWPRISELIISKFLSKVVPEDASKLADFQKI
IERTSQFETALKELDFVSPSDAEGRLSKYAENVEVHFASRKKIEILAKARNLLLQCNFTI
SQEFAKRNASLKSDGVESLDVNSSKHVVRLLFSSEMCVVSEAASQLMHLVHKTLEDVCVS
SARVASEFYHAARDSILLYEAVVPVKLEKQLNGINQAAVLLHNDCLYLFEEILGLAFEYR
ASFPSSIKEYAVFADVAPRFRLMVEEVLQRQVQLVISSLQEAIDSADGFQDTHQIKQFES
AKFSIEQVVFSLEKVHMIWEPVLRPKTYKQSMCVVLESVFRRITRDILLLDDMAADETFQ
LQRLIYLMLENLSSLLGSLKSADDTSRPLDDLIPSLRKTRKLAELLDMPLMSITSAWESG
ELFSCNFTRIEVQDFIKAIFTDSPLRKECLWRIEDVSQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgccggagattgacgcgttgtttgaatcaatcaatgttcgggaccttctagccggacac
gatctcaacgatccgacgactccattatcggcgccggatctgcgcctcctcataaaccgc
ttggagtctcattccctgcggatcaagtccaaagttcagtcctacctcgtcgcccatcac
tccgaattctcggagcttttctcaacctgtcaagacaccgtctccaggactcgcttgatc
tccgacgacctctcagatgtcctgcaattgatttccgaccgtccgattgatgttgagatt
cgtagtgtagttgatgagattaacgagaagaccaaggaagtgaaattgaagagagaatcg
cttgatttagtgagtgcgatcgtgggaatctgcgaggcattgcaggaaacgaaggaagct
ctgaaaggaggacgttttagattcgccgctgagagaatcagagaactgaaagttgtactg
aggattggtgaagaagaagaagaaggagaacctgtggcttacgttttgcttaggaaggaa
tggtctgattgctttgacgagattcaagacgtgcttgcaaagttcatggaaaatgcagtg
cgtttcgaggtggactcgcgtaagctcaggattaattatcagctaagcgttggggagact
actggaatcgctcttagtactgttctcgaggcaatggaggtgattggaatgttagattat
gggcttgcaaaagcagctgactcaatcttcaagcatgtcattaccccagctgtaactcat
gcgtctacctttgtcgctgtagaagattcaagtaaaacctcaggagaaataaccgaagcg
atattaaagctagatcaatcctcagatcataaggttgaagatgtggatggaggtgcaata
tatacaggaattgttaagattgttaaattcatttgcagttccttgtgctttggaaatgtt
acatggatccgttctttcgggagattgtcatggccgaggatatcagagctaattatttct
aaatttctttcaaaggttgtccccgaagacgcttcaaaacttgctgactttcagaaaatt
attgagcggacctctcagtttgaaacagctctaaaggaattggattttgtttcaccatct
gatgcggagggaaggctcagcaaatatgctgaaaatgttgaggttcattttgcatctaga
aagaagatagaaattctagcaaaagcaagaaatttgctgttgcagtgtaattttacgatt
tcccaggagtttgctaagagaaatgccagtttaaagtctgatggtgtggaatctttagat
gtgaattcttccaagcacgtcgttcgcttacttttttcatctgaaatgtgtgtggtgtct
gaagctgcttctcaacttatgcatttggtgcataagactctcgaggatgtctgtgtgtct
tctgcaagggttgcgtcagagttctaccatgctgctcgagattctatacttttatatgaa
gctgttgttcccgtcaagttagagaaacaactcaatggcatcaatcaggctgctgttctt
ctgcacaacgattgtctatatttgttcgaagagatacttggacttgcttttgagtatcgt
gctagcttccctagttccatcaaggaatatgcagtatttgctgacgtagccccaagattt
agattgatggtagaagaagttttgcaaagacaagttcagctagtaatttcgagtttgcaa
gaggctatagatagtgcagatggatttcaggatactcatcaaataaagcaattcgaatct
gccaagtttagcattgagcaggttgtcttcagtttagagaaagtgcatatgatatgggag
ccggtcttacggcccaaaacttacaaacaaagcatgtgcgtagttttggagtctgtcttt
cgcagaataaccagagacattcttcttctagacgacatggctgctgatgaaacttttcag
ctacaaagactgatttatcttatgttggagaatctatcttctttactcggttccctgaaa
tctgcagacgatacttctcgtcctcttgatgatctcataccatctttgcgtaaaacccga
aaactagcagaactattggatatgcctctcatgtctataacttcagcttgggaaagtggc
gagttgtttagttgcaattttacaagaatagaggtacaagatttcatcaaagctatattt
acagattcgcctctgagaaaagaatgtttatggaggatagaagacgttagccagtag
DBGET
integrated database retrieval system
