Eutrema salsugineum (saltwater cress): EUTSA_v10016364mg
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Entry
EUTSA_v10016364mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
EUTSA_v10016364mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10016364mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v10016364mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
U-box type E3
EUTSA_v10016364mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
zf-C3HC4_4
Neurochondrin
zf-Nse
Arm_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
KAP
TRF
DUF3734
DUF2448
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
18027496
NCBI-ProteinID:
XP_006409917
UniProt:
V4LLD1
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MLKFQKVTSLLEQALSEIPYENLEISDELQEQVELVLIQLRRAIGKGGDTHDDELHKDLQ
SLYVSYDVTDSDILRRVAEKLQLMTITDLTQESLALLEMVSSSGGDPGESFEKMMMVLKK
IKDFVQTNNPNLDQAPMGQKPPLSKSQDGKQNIPIPPEDFRCPISLELMNDPVIVSSGQT
YDRDCIKKWLEGGHSTCPKTQETLTSDTVTPNYALRSLIDQWCESNGIEPPKRHNKSSQA
SSSSSLLPTDEQNKIEQLLRKLTSQLPEDQRSATEEIRLLAKQNNHNRVAIAASGAIPLL
VNLLTASDDSRTQEHAVTSILNLSIYQENKGRIVSTFGAVPGIVHVLQKGTMEARENAAA
TLFSLSVIDENKVTIGASGAIPPLVTLLSEGSRRGKKDAATALFNLCIFQGNKGKAVRAG
LVPVLMRLLREPESGMVDEALAMLAIVSSHPEGKIVVGTANAVAVMVDYVRSGSPRNKEN
AAAVLVHLCSWNQQHLIEAEKLGVMSLLIEMAENGTDRGKRKAAQLLNRFSRFNDQQKQS
GLVVEDQISLI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatttcagaaagtgacatctctattagaacaagctttgagtgagattccttat
gagaatcttgaaatctcagatgaactccaagaacaggttgagcttgttctaatccagtta
agaagagcaataggcaaaggaggagatacgcacgacgatgagttacataaagatcttcaa
tctctttacgttagctatgatgtaacagactccgatatcctcaggagagtagctgagaag
cttcaactaatgaccattacagaccttacgcaagagtcgttggctcttcttgagatggtt
agttccagtggaggagatcccggtgaaagctttgagaagatgatgatggttctcaagaaa
atcaaagactttgtgcaaaccaataaccctaacttggaccaagctcccatgggacaaaaa
cctccactttcaaagtcgcaagacggaaaacagaacatcccaatcccgcctgaagatttc
cgttgtccgatttcactagaactgatgaatgatccggttattgtttcttcagggcagaca
tatgaccgtgactgcatcaagaagtggctagaaggaggacactctacgtgtccaaagacg
caagaaacgcttacaagcgatacagtcacaccaaactacgcactaagaagccttatagat
caatggtgtgaatcaaacggcatcgaacctccaaaacgtcacaacaagagtagtcaagcc
tcatcatcatcctccttacttcctaccgatgaacagaacaagattgagcaactcctacgt
aagctcacttctcaactccccgaagaccaaagatccgccacagaagaaatccggcttctt
gcgaaacagaacaaccataaccgagtcgccatcgctgcatcaggcgcgattcctcttctt
gtgaatctacttacagcatccgacgattcacggactcaagaacacgccgtgacatcgata
cttaacctctcgatataccaagagaacaaagggaggattgtttccacgtttggagcggtt
cctggtattgttcatgtgcttcagaaaggcaccatggaagctagagaaaacgcagcagct
acactgttcagcctctcggttatagacgagaacaaagtgacaataggcgcctcaggagcg
atccctcctcttgtgactttgcttagcgaaggatcacggagaggtaaaaaagatgcagcc
actgctctgttcaacctctgcatatttcaagggaacaaaggaaaagcggtcagagccggt
ttagttcctgtgctaatgcggttactaagagaaccggaaagcggtatggtcgatgaagcg
cttgctatgttagccattgtatcgagtcatcctgaagggaaaatagtggttggaacggct
aatgcggttgcggttatggttgattacgttagaagcgggtcgccgcggaacaaggaaaac
gcggctgcggttttagtgcatttgtgttcatggaatcagcagcatttgattgaagctgag
aagttaggggttatgagtttgttaatagaaatggctgagaatggtactgatagagggaaa
cgcaaagcggcacagttacttaaccgctttagccgttttaacgaccagcaaaaacagtct
ggcttggttgtggaagatcaaatctctctgatatga
DBGET
integrated database retrieval system
