KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10016684mg
Entry
EUTSA_v10016684mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10016684mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10016684mg
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10016684mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     EUTSA_v10016684mg
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     EUTSA_v10016684mg
Spliceosome [BR:eus03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    EUTSA_v10016684mg
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 18027644
NCBI-ProteinID: XP_006411373
UniProt: V4P0N0
LinkDB
Position
Unknown
AA seq 432 aa
MARKRKLESDSNEASEPPQKQQQSKEEDQINGDEEIEHDGVEEAKDNGDNNNTASDHTEA
AATSSVSGNQGDKDDEEPIEDLLEPFSKEQLSILLKEAAERHRDVADRIRIVADEDPVHR
KIFVHGLGWDTKADALIEAFKQYGEIEDCKSVVDKVSGQSKGYGFILFKSRSGARNALKQ
PQKKIGTRMTACQLASIGPVQGNSVAAPVQHFSPEHVQRKIYVSNVSADLDPQKLLEFFS
RFGEIEEGPLGLDKATGRPKGFTLFVYKSPESAKKALEEPHKTFEGHVLHCHKANDGPKP
VNKQNQHYYKSHNHDSRYQRNENSGYGAPAGHGHFIAGNNQAAQGLNPAIITALLASQGA
GFGQALLGTASPGAAAGLPSGYGAQANITPGVFPGYGFQAGFQGGYQTQQPGQGGAGREQ
HGVWYGGPYMGQ
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcaaggaagagaaagctcgaatctgactccaacgaggcttcagagccgccgcagaag
cagcagcaatctaaagaagaggatcagattaacggagatgaagaaattgaacacgacgga
gtagaggaagctaaagacaatggagacaataataatacggcaagtgatcatacggaagcg
gcggcgacgtcgtcagtatctgggaatcaaggggataaggatgacgaagagccaatcgag
gatctcttggagccattttcgaaggagcaactctcgattcttctcaaggaagcggcggag
agacatcgcgatgtcgccgatcgaatccggattgtggcggacgaggatcctgttcatcgt
aaaatcttcgtgcacgggctaggttgggatactaaagccgacgcgcttatcgaagctttt
aagcagtacggtgagatcgaagactgcaaatccgtcgtcgataaggtctctgggcaatcc
aaaggttacggctttatcctcttcaagtcacgttccggtgctcgcaacgctctcaagcag
ccgcagaagaagatcggaacacgtatgacggcgtgccagctggcgtctataggacctgtc
caaggaaactccgtcgcggcgcctgttcagcatttcagccccgagcatgtccagaggaag
atttatgtcagtaacgttagcgcagacctcgatccgcaaaaactgctggagtttttctcg
agattcggagagattgaagaaggtcctttggggcttgataaagctactgggagaccaaaa
ggcttcactttgtttgtatataagtcacctgaaagcgctaagaaggcattggaggagcca
cacaagaccttcgaaggccacgtcttgcattgccacaaagcaaacgacgggccaaagccg
gttaataagcagaatcagcattactacaagtctcacaatcacgattcacgctaccaaagg
aacgaaaactccggttatggtgcacctgcaggccatggacatttcatagctggtaataac
caagctgcgcaggggttaaacccggccattatcacagctttgctggcatctcagggtgct
ggatttggacaggctttgttggggacagctagtccaggagctgcagctggattgccaagt
ggatatggtgctcaagcaaatatcacaccaggagtctttcctgggtatggtttccaagcc
ggttttcagggcggttatcagactcagcaacctggtcagggaggtgctggaagagagcag
catggtgtatggtatggtggtccgtacatgggccaatag

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