Eutrema salsugineum (saltwater cress): EUTSA_v10016946mg
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Entry
EUTSA_v10016946mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10016946mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eus01009
]
EUTSA_v10016946mg
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10016946mg
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10016946mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10016946mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
EUTSA_v10016946mg
Protein phosphatases and associated proteins [BR:
eus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
EUTSA_v10016946mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EUTSA_v10016946mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EUTSA_v10016946mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
EUTSA_v10016946mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
18027854
NCBI-ProteinID:
XP_006409987
UniProt:
V4LLL1
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MAEKPAPEQEQKRAMDPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFL
QQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLL
LAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD
RILCMHGGISPELTSLDQIRNISRPMDIPDSGLVCDLLWSDPSGDVKGWGMNDRGVSYTF
GADKVAEFLEKNDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDE
SLMCSFQILKPSDKRSPFL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagccggcgccggagcaggagcagaagcgagcgatggacccggccgttctc
gacgatataattcgccgtctggttgagtttcggaacacgaggcctggatcgggcaagcaa
gttcacctcagcgaaggtgaaatccgtcagctttgtgctgtctccaaagaaatctttctc
cagcaacctaatcttctcgaactcgaagctcccatcaagatctgcggtgatattcacggg
cagtattcagatctattgaggctttttgagtatggaggcttccctcctgaagccaattat
ttgttcctaggtgattacgtagaccgtggaaagcaaagcttggaaacaatatgccttctc
ctagcttacaaaatcaagtaccctgagaacttcttcttgttgagagggaaccacgaatgt
gcctccattaaccgtatttatggcttctacgacgagtgcaaacgcaggttcaacgtcagg
ctctggaaaatattcacagattgcttcaactgtctccctgtggctgctttaatcgatgac
agaatactatgtatgcatggtgggatttcaccagagctgacaagtttggaccagattagg
aacatttcacgccccatggatattccggactcgggtttggtgtgtgatttgctttggtct
gatcctagtggagacgtcaaaggctgggggatgaacgatcgtggtgtttcatacactttt
ggagctgacaaagttgcagagtttttagagaaaaacgacatggaccttatctgtcgtgca
caccaggttgttgaagatggatacgagttcttcgcggaaagacagcttgttacggtgttt
tcagctccaaactactgtggggaattcgacaacgctggtgcaatgatgagcattgacgag
agcttaatgtgttcattccaaattctaaagccgtcggataagagatcgccgtttctatga
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integrated database retrieval system
