Eutrema salsugineum (saltwater cress): EUTSA_v10017995mg
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Entry
EUTSA_v10017995mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10017995mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10017995mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10017995mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
PUMA_CC
XLF_CC
Motif
Other DBs
NCBI-GeneID:
18008040
NCBI-ProteinID:
XP_006389901
UniProt:
V4KBS7
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MPLFMPDEELARLSGDAASVVAERADEYIRKLYAELDSVRAKADASSITAEQTCSLLEQK
YLSLSQDFSSLESQNAQLQSDFDNRLAELAQSQAQKHQLHLQSIEKDGEVERMTTEMSEL
HKSKRQLMELLEQKDAEISEKNSTIKSYLDKIIKLTDSSSEKESRVAEAGAELARSQAMC
SRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDFEAEMSAKLVDVEKNYNECSSSL
NWHKERLRELETKISSLQEELSACKDAATTTEEQYNAELSTANKLVELYKESSEEWSRKA
GELEGVIKALEARLSQVESGNKDRLEKEVSIKQQLEKEVEDLQQKLEKCEEEIEKTRKTD
ELTLIPFSSFTRGRGVDDSGTSNLIEESQGIISKVPAGVSGTALAASLLRDGWSLAKIYE
KYQEAVDALRHEQLGRREAELILQRVLSELEEKVGFIQEERGEYERMVEAYSLISQKLQD
SVSEQSNMEKLIMELKADLRRHERENILSQKDISDLQKQVTILLKECRDVQLRCGAARDD
DEDDPQLSDVEMDTESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMEL
KEKFEIDLKKKTDEASSKVAIVLKRAEEQGQMIESLHTSVAMYKRLYEEEQKFHLSHSRS
SDLPPVPGRENFLHMLEDSQEATKKAQEKAFERVRSLEEDLTKARSEIIAIRSERDKLAM
EANFAREKLEGIMKESERKREEMNNVLARNIEFSQLIIDHQRKLRESSESLHAAEEISRK
LSMEVSVLKHEKEMLSNAEKRASDEVSALSQRVYRLQATLDTIQSTEEVREEARAADRRK
QEEHIKQLEKEWAEAKQELQEERRNARNSTSDRNQTLNNALMQAEEKGKELANALKALSA
AESRASVAEARLSDLEKKIRSSDPKALDLNSGGAVSLSDNEISQELRTSKEEIEKLRGEV
ESSNSHMLQYKSIAQVNETALKQMECAHENFRLEAEKRQKSLEAELVSLREKVSELENDC
IQKSKQIATAAAGKEDALVSASAEIASLREENLVKNSQIEAMNIQLSTLKNDLETEHEKW
RAAQRNYERQVILQSETIQELTKTSQALAALQEEASELRKLADARGTENSELISKWSEEK
CMLEQQKNLAEKKFHELNEQNKLLHSRLEAMHLHSAEKDSRSGCTGSDQLEDSGLQSVVN
YLRRTKEIAETEISLMRQEKLRLQSQLESAVKMAESARGSLNAERASTRASLLTEDEIKS
LQLQASEMNLLRESNMQLREENKHNFDECQRLREVAQKARVESENSENILKQKQSELDLC
MKEMEMLRKETDLQKKRVDELRETYRNIDVADYNRLKDEVRQLEEKLKGKDAHIEDFKKL
LLEKQNKISLLEKELTNCKKDLSEREKRLDAAQQAQATMQSETEKLKAEISKLKADSDRF
RKSFSNVKKKLDKEKEDLSKENQSLCKQLEEAKEAGKRTTTDAMVEQAVKERDEKEQKIQ
ILDKFVHTLKDDLKKKDDELTKEKTERKTAEKVFGDSLARVNKEKTKVEEELVKLERYQT
ALAHLSEELEKLKQADGNLPEGTSAVQVLSGSILNDQAAAYVSAVDYFERMARTIALNSQ
GTTKSTDIVTEPSPGTVEPSAITRASPSTLSKAPVATTQQPPKASSDISKVKRLTLQKPS
TELRRPSRRIIRPQLVKPEEPPQGDVEMPEAEGAGDEGKQPSSLVTESQETTIVPPAQTH
VRKRQADLSASDPQQEETSPEIAPPVSKKAKGSESQPDAAEGENYSKEPGMDESMGATTA
ADGDNEETEAETAEDKTEESAEAQEENEAEVQDKADEPLEEIPTETETIPTEEEFMDQTE
QENQDLLTDVEFDKEEGEVDLDTLEDLDETTDVGNMMRSPEKGEMQPETLATPTQSPSRI
ETAMEEAETTIEPPVEDVKNDEGGDVAAEETSDKPNNGNNQQATETDLKPAATVATTVSA
SATPSTSSTPASATPSETPETEETKRAASPSGTIVLLSARAKEKAAIRQAGAANLGGTRA
PIPATRGRGRGLNIRGRLVPRGGRAPRGGRGQSPSQP
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtttatgccagacgaagagctggcgcggctatctggcgatgccgcgtctgta
gtggctgagagagccgacgagtacataaggaagttgtacgcagagttagatagtgtacgc
gcgaaggctgatgcttcttccatcacggcggagcagacgtgttcgcttctcgagcagaag
tacctctcgctctctcaggatttctcctcgcttgaatctcagaatgcacaacttcagtcc
gatttcgacaatcgtttagctgaactcgcacagtctcaggcgcagaagcaccagcttcat
ttgcaatcgattgagaaggatggagaggtagagaggatgacgacggaaatgtcggagcta
cacaagtctaagaggcaactgatggagttgctggagcagaaagatgccgagattagcgag
aagaattcgaccatcaagagctacttggataaaattattaagctgactgactctagttcg
gaaaaggaatccagagttgctgaagcgggcgcagaattggcacgttcccaagctatgtgc
agtcgtctatctcaggagaaagaacttatggaaaggcataccaaatggcttgatgaggag
ttaacagccaaagttgacagttatgctgaactccggagaaggcattctgatttcgaggct
gaaatgtcagccaagcttgtggatgttgagaaaaattataacgagtgttctagctcgtta
aattggcacaaggaaagattgagagagctcgaaacaaagattagttcactacaagaggaa
ctcagcgcgtgcaaagatgcagcaacgaccactgaagagcagtacaatgctgaactttcc
actgcgaacaagcttgttgagctgtacaaggaaagttcggaggaatggtctagaaaggct
ggggaacttgaaggtgtcattaaggccttagaggcacgcttgagccaagtcgagagtggt
aacaaagacagacttgagaaagaagtgtctataaagcagcagttagagaaggaggtcgaa
gaccttcaacaaaaactggagaagtgtgaagaagaaattgagaaaactaggaaaacagat
gagctaacgcttatacctttcagcagtttcacaagaggcagaggggttgacgattctggg
accagcaacttgatagaggaaagccagggaataatttctaaggttcctgctggtgtgtca
ggaacggcgctagcagcttcacttttacgtgatggatggagtctggccaaaatttatgag
aagtatcaagaggctgttgatgccttgaggcatgaacaattaggtcgaagggaagctgag
ttgatactacaacgggttttatccgaattagaagagaaagtagggttcatccaagaggaa
agaggagagtatgagcggatggttgaagcttattctctaattagtcaaaaacttcaggat
tctgtatctgaacaatcaaatatggagaagctcatcatggagctaaaggctgacttaagg
aggcatgaacgtgaaaacattctctctcagaaagatatatctgacctacagaagcaggtt
acaatacttctgaaggagtgtcgtgatgtccaacttcgctgtggtgctgccagagatgat
gatgaagatgatcctcagctctctgatgttgagatggatacggaatctgaagctgataaa
ataatttcagagcatcttctgaagtttaaagatataaatggactagttgagcagaatgtg
aagctcaggaatcttgttcgtagtctctcggagcagattgaaagtagggaaatggagttg
aaggaaaagtttgagatagacctgaagaaaaagaccgatgaagcttcttccaaggtagct
atcgttctaaagagagctgaagagcagggtcaaatgattgaatcactgcatacttctgtt
gcaatgtataaacgactatatgaagaggaacaaaaatttcatttatctcattctcgttct
tcagatttgcctccagtgccaggaagagagaactttttacatatgcttgaggattcacag
gaagctactaaaaaagcccaagaaaaagcttttgagcgcgtccgaagtctcgaagaggat
ttaacgaaggctaggagtgagataattgcgataaggtctgaacgggataagttggccatg
gaggcaaattttgctagggaaaaactagagggcatcatgaaagaatctgaacggaagaga
gaagaaatgaacaatgttttggcaagaaacattgagttctcgcagctgatcatcgaccac
caacggaaattgcgtgagagttctgagtctctccatgcagcagaagagatttctagaaaa
ttatctatggaggtctctgttttaaaacatgaaaaagaaatgttatcaaatgctgaaaaa
agagcatcggatgaagtttctgctctatctcagagagtttatcgtcttcaggctaccttg
gatactatacagagcacagaggaagttcgtgaggaagcaagagctgccgacagaaggaaa
caagaggagcatatcaagcaacttgagaaagaatgggctgaagctaaacaagaattgcaa
gaagaaaggaggaatgcgcggaatagcacttcggaccgcaatcaaactttgaacaatgct
ctaatgcaggcagaagaaaaggggaaagaattggctaatgccttgaaggctctctcggcg
gcagagtccagggcctctgtggctgaggctagactttctgatttggagaagaagataaga
tcttcagatcctaaggctcttgatctgaacagtggtggagctgtctctctttctgataat
gagatttcccaagaactgcgtacttccaaggaagaaatcgaaaaattgaggggagaagta
gaatctagcaatagccacatgcttcagtacaagagtatagctcaggtgaatgaaactgcg
ctgaagcagatggaatgtgctcatgagaattttagacttgaggctgaaaagagacaaaaa
tcgttggaagcagagcttgtttctctgagggagaaggtgtcagaacttgaaaacgattgt
atacagaaatccaagcaaattgcaactgctgctgcagggaaagaagatgctcttgtatca
gcatcagctgaaattgcaagtctgagagaagaaaacttagttaaaaattcccaaatcgaa
gcaatgaatatccaattgtctaccttgaagaacgatctggagacagaacatgagaaatgg
cgtgctgctcagagaaattatgaaagacaggttattctgcagtctgaaactattcaagag
ctgactaaaacatcacaagctttggcagcccttcaagaggaggcatctgaactacgtaaa
ttggctgatgcaaggggaacggaaaattcagagcttatctccaagtggagtgaagagaaa
tgtatgctagaacagcaaaagaacctagcggagaagaagtttcatgaactcaatgaacag
aacaaattacttcacagccgacttgaggctatgcatcttcactcggctgagaaagatagc
cgttctggatgcaccggctcggatcaacttgaagattctggtttgcagagtgtagttaat
tatttacgcagaacaaaggaaattgctgaaacagagatctcactaatgagacaggaaaaa
ttacggttgcaatcgcaacttgagagtgcagtaaagatggcagaatctgcccggggatca
cttaatgctgagcgggccagtacaagggcgtcattattgacggaagatgaaatcaaatct
cttcagcttcaggctagtgagatgaacctgctccgggaaagcaacatgcaactcagggaa
gaaaataaacacaattttgacgaatgccagagattgcgtgaggtagctcaaaaggctagg
gtggaatctgaaaactcggaaaacatattgaagcaaaagcaatctgagttagacttgtgt
atgaaagagatggaaatgctaaggaaggagacagatcttcaaaagaagagggttgatgag
ttacgagagacgtatagaaacattgatgttgctgactacaatcgcctcaaagatgaagtg
cggcaactcgaggaaaaactgaaagggaaagatgctcatattgaagacttcaagaagctg
ctattagagaagcagaataagatatctctactagagaaggagctaacaaactgcaaaaaa
gatctgagtgagagggagaagaggttagacgctgctcagcaagcacaggctactatgcag
tcagagactgagaagctgaaagcagagatctctaagttgaaagcagattctgataggttc
aggaagtctttttctaacgtgaagaaaaagctcgacaaagaaaaggaggatttgagcaaa
gaaaatcagtcactctgtaaacagttagaggaagccaaagaggctggaaagagaacaaca
actgatgctatggtggagcaggccgttaaggagagagatgagaaagaacaaaaaattcag
attttggataagtttgtccatacactaaaagatgacctgaagaagaaggatgacgaatta
actaaagagaaaacagaacgcaagactgctgagaaggtatttggagactccttggccaga
gttaataaggagaaaacaaaagtggaagaagagcttgttaagctcgagagatatcagacg
gcattggctcatctctctgaagaattggagaaattgaaacaagcggacggcaatcttcct
gagggtacttcagctgtccaggttctctctggaagcatattgaatgaccaagctgccgcc
tatgtgtcagctgtagactattttgaacgcatggctcgtactattgccctaaattctcaa
ggaaccacaaaatctactgatatagtgactgaaccttcccctggtacagttgagccgtca
gccatcacgagagcctctccttcaacgctttcaaaagctccggtggcaactacccagcag
ccacccaaagcatcatcagacattagcaaagtgaagagattgactttacagaaaccaagc
actgagctccgcagaccgagtaggaggattattcgtcctcaacttgtcaaaccagaggaa
cctccccaaggtgatgttgagatgccagaagctgagggagctggtgatgaaggaaaacag
ccttcctcccttgtaacagagagccaagaaaccacaattgtaccgcctgctcagacacat
gtccgtaaacgccaggctgatttgtcggcttccgatccacagcaagaggaaaccagtccc
gagattgccccacctgtgtcgaagaaggcaaagggatccgagtctcaacctgatgctgcc
gaaggtgaaaactactctaaagagccgggcatggatgaatccatgggtgctactaccgcc
gccgacggtgacaatgaagaaacagaagccgagactgcagaggataaaaccgaggaatct
gcggaagcacaagaagaaaatgaagctgaagtgcaggataaagctgatgaaccattggaa
gaaattccaacggagacggaaaccatcccaaccgaagaagagtttatggatcagaccgaa
caagagaatcaagatcttctgacagacgtggaatttgataaagaagaaggagaagtcgat
ctagatacactggaagatctcgacgagactacggatgtaggtaacatgatgaggagccca
gagaaaggagagatgcagcctgagacgctagctacacccacgcaatcacctagtaggatt
gagaccgcaatggaggaagcggaaacaaccattgaaccaccagtagaagatgttaagaac
gatgaaggaggtgatgtagctgcggaagaaacctctgataaacccaacaatggtaacaat
caacaagccacggaaactgatctcaagccagcggccacagtagctacaacagtctctgca
tctgccaccccatccacttcctctactccagcttctgctacacccagcgaaactccagaa
acagaagaaacgaaaagagcagcgtctccaagtggaactatagtgttactatctgctaga
gcaaaagaaaaagcagctataagacaagccggagcggccaatctaggaggaactcgagct
cctataccagccaccagaggtcgtggtcgaggtttaaacatacgaggtcgtttggtccct
cgtggtggccgagccccgcgtggtggacgtgggcaatccccgagccagccgtga
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