Eutrema salsugineum (saltwater cress): EUTSA_v10018014mg
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Entry
EUTSA_v10018014mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10018014mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
EUTSA_v10018014mg
REST complex
EUTSA_v10018014mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
EUTSA_v10018014mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
18008134
NCBI-ProteinID:
XP_006390928
UniProt:
V4KAV1
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MVGGGSAQKLTTNDALAYLKAVKDKFQDKREKYDEFLEVMKDFKAQRVDTSGVILRVKEL
FKGNRELILGFNTFLPKGFEITLLPEDDQPLPKKPVEFEEAISFVNKIKTRFQGDDRVYK
SFLDILNMYRKENKSITDVYQEVAILFRDHEDLLVEFTHFLPDTSGTASTNDTVKMSIRD
RGIKSLPTMRDSDKKERIITPHPDRDLKAEHMDIDHERSLMKESKEEIRRIDKMTDYMDD
RDRRGYGIDNRGLEHDSQKEQFLHSKKKLTLKDDDSPEISNQAREGDKFCGAIATSSTYD
DKGHIHELAFVDRVKAKLNTSDYQEFLRCLNLFSKEIISQPELQSLVGDLIGGYPDLMDA
FRVFLVQCEKNEGLLSGIVTKKSLWSDGKCPQPTKSQDKDTDREREKLERFRERDREKER
LEKAAASQKWAKPISELDLSNCEQCTPSYRLLPKNYPIPIASQKMEIGSQVLNDHWVSVT
SGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNSATNRVEELLAKINSNELKTDT
PICIEDHLTALNLRCIERLYGDHGLDVMDLLKKNAYLALPVILTRLKQKQEEWARCRSDF
NKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEIAEKKRAEDDALLALAAG
NRRTICSNMSFDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFLEPMFGVPCRP
QGAEDREDAVKSTNQNLKSGSPSEGSPQNGASVANSVRSNGPRKASESNQLRQASDLDRD
VTASKTSDALLSCDNTQNDKMPKNLTTHDEKLETKQAVSSIERMHSSNAPPVDGLLPQRN
GKTSILSIAGLSNSNPKPSAVTNGTEMELKPNHVNGPRLEVFSNGTLAEISSTQTKVERE
EGELSPTGDFGEDNFAVHAENDVEALSKGKEIAGNNLNQRSSGENDANGNEEEGDESAPR
SSDGSGNTSQNGDVSGTESGDGEDCYPEDDMEHNNKAESEGEAEEGMSDAHDDAAGDKAV
LPISVRNMLHVKPLAKYVPPALRDKDKDESQKSSRVFYGNDSFYVLFRLHQILYDRILSA
KINSSSPERKWKTSNSTNPADSYARFMNALYNLLDGTSDNSKFEDDCRAIIGTQSYVLFT
LDKLIYKLIKHLQGVAADEMDNKLQQLYSYEKTRKPEKFLDAVYYENARVLLPDEDIYRI
ECKLSTPTKLSIQLLDYGYDKPDVTSISMDPAFAAYLHNNFLSYQSNVKENPRIYLKRNK
RKNGGDDELCITDRVKIINGLECKITCSSSKVSYVLDTEDVLHRAKRRKVLNQSGSALRQ
DPVSSGSLINQRRIQRYQKLLTGQ
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggttggaggagggagtgcacagaagctaacaacaaatgatgcgcttgcatacctcaag
gctgtcaaggataaatttcaagataaacgcgaaaagtacgatgagtttcttgaggtcatg
aaagatttcaaagctcaaagagttgatactagtggtgtcatcttgagggtgaaagaactc
ttcaagggtaaccgagaactgattttgggattcaatactttcttgccaaagggattcgag
ataaccctcttacccgaggatgaccaacctctaccaaagaagcctgttgagtttgaggaa
gctattagttttgtcaacaagattaagacaaggttccaaggcgatgaccgtgtatacaaa
tcgtttttagacattttgaatatgtatagaaaggaaaacaagtccattactgatgtctac
caggaggtggctatccttttccgggaccatgaagatttgcttgtggagttcactcacttt
ctccctgatacttcaggaactgcctctactaatgatactgtaaaaatgtcaatacgtgat
agaggcattaaatctcttcccaccatgcgggactctgacaagaaggaacggattattact
ccacatcctgaccgcgacctcaaagctgaacatatggacatagaccatgaaagatctttg
atgaaagaaagtaaagaagaaattagacgcattgacaaaatgactgattacatggatgac
agagacaggagaggttatggaatagataacagaggtcttgaacacgatagccagaaagag
cagttcctccacagtaaaaagaagctgacacttaaggatgatgattctcctgagatttca
aatcaggctagagaaggagacaagttttgtggagccattgccacttcatctacttatgat
gataaaggtcatatccatgaacttgcttttgttgatagagtgaaggcaaagcttaatacc
tctgactaccaagagttcttacgatgtcttaatctcttttcaaaggagataatcagccaa
ccagagttgcagtctttggtgggcgatttaattggaggatatccagaccttatggatgcc
ttcagagtctttttggttcagtgtgaaaagaacgaaggattactctctggtatcgtaact
aagaagtccttgtggagtgatggcaaatgtcctcaacctacgaagtcacaggacaaagat
actgaccgagaacgtgagaagcttgaaaggtttagagaaagagaccgtgagaaggagagg
cttgaaaaggcggcagcgagccagaaatgggctaaacctatcagtgaactggatctttca
aactgtgaacaatgcactcctagttatcggttacttccaaagaattacccaattcctatt
gcaagccaaaaaatggagattggtagccaggtgcttaatgaccattgggtctccgtcact
tcaggaagtgaagactattcatttaaacacatgcgcaagaaccagtacgaagagagcctc
ttccgatgtgaagatgacaggttcgagctagacatgctattagagtctgtgaactcggct
acgaatcgagtggaagagttattggcaaagattaacagtaatgaactgaaaacagatact
cccatatgtatcgaggatcacctcacagctctaaacctaagatgcatagaacggttatat
ggagaccacgggctcgatgtgatggatttgttaaagaagaatgcctatcttgctttacct
gtaatactgacccgtttgaaacagaagcaagaggagtgggcaaggtgtcgctctgatttt
aacaaagtctgggctgacatatataccaagaactaccacagatcacttgaccatcgcagt
ttttatttcaaacagcaggactcaaagaatctgagcacgaaagcgttgcttgcagagata
aaagagattgctgagaagaagcgtgcagaagatgatgcacttcttgctcttgcggctgga
aatagacgtactatttgctccaacatgagttttgattatccagatcctgatcttcacgaa
gatctgtatcagctgatcaagtattcatgtggagaaatgtgttcaaccgagcagttagat
aaggtaatgaaggtatggacagaatttctggaaccaatgtttggtgttccttgtcgccct
caaggtgctgaagaccgagaagatgctgtcaagtctacgaatcagaatctaaaaagtggt
agcccaagcgagggcagtcctcaaaatggagctagtgttgccaactcagtccggtcaaat
ggccctcgaaaagccagtgaaagtaatcaattgcggcaagctagtgatttggatagagat
gtcactgcgagtaagacctcagatgccttattatcatgtgacaacactcagaatgataaa
atgccgaagaatctaaccacacatgacgaaaagctcgaaaccaaacaagctgtttcttct
attgaacgtatgcatagctcaaatgcaccgcctgtggatggattgctacctcaaaggaat
ggaaaaaccagcattttatccattgccgggcttagcaatagtaatccaaaacctagtgct
gtaaccaatggaacagagatggagttgaagccaaaccacgtaaacgggccacgcttagag
gtattttcaaatgggacattggccgagatatcaagtactcagaccaaagtcgaaagagag
gagggtgagctttctccaacaggggattttggggaagataattttgcagttcatgcagag
aatgacgtggaggctctcagcaaaggtaaagagattgctggaaacaacttaaaccagagg
agtagtggagagaatgatgctaatggcaatgaagaagaaggggatgaaagtgccccaaga
tcatcagatggaagcggaaacacatcccagaatggtgatgtttctggaactgagtctggt
gatggtgaagattgttaccctgaagatgatatggaacataataacaaggcagaaagcgaa
ggtgaggcagaagaaggcatgtctgatgctcatgatgatgctgcaggagataaggctgtg
ttgcccatttcagtgagaaacatgctacatgtgaagcctctggcaaagtatgtccctcca
gctttgcgcgataaggacaaagatgaatctcagaagagctctcgagtgttttatgggaat
gattcgttttacgttcttttcaggcttcatcagattctgtatgacagaatattatcagca
aaaatcaattcatcgtctccagagagaaagtggaagacctcaaattcaacaaaccctgcg
gattcatacgccagattcatgaatgctctctacaacttgcttgatggcacatctgataat
tcaaaatttgaagatgattgccgagcaattattggaacgcagtcatatgttctctttaca
ttggacaaactgatctataagctcatcaagcatctccaaggagtagcagctgatgagatg
gacaacaaactacaacagctatattcatatgagaaaacccggaagcctgaaaagtttctc
gatgctgtttattatgaaaatgctcgtgttcttcttcctgatgaagatatataccgcatc
gaatgtaaactatctacaccaaccaaactctctattcagcttctggactacggatatgat
aagcctgatgtgacctccatatccatggacccagcttttgctgcttaccttcacaataac
ttcctttcctatcaatccaatgtgaaagaaaatcctcgaatctatttaaaacggaataag
cgtaaaaatggtggtgacgatgaactgtgcatcacggatcgagttaagattattaacggt
ttggaatgcaagatcacatgcagttcttcaaaggtctcgtatgtgttagacacagaggat
gttttgcatcgtgctaagaggaggaaagttttgaaccaaagcggctcagctctcagacag
gaccctgtttccagtggttctttaattaaccaaaggaggatacaaagataccaaaaactt
ctcaccggccaatga
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