Eutrema salsugineum (saltwater cress): EUTSA_v10018057mg
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Entry
EUTSA_v10018057mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10018057mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10018057mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10018057mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10018057mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10018057mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
18008435
NCBI-ProteinID:
XP_006389822
UniProt:
V4KIN7
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MASLSILPAPDISNLDSRKKRRISLDANPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELV
QRELENPDYCSRVPDFTVGRIGYGYIKFLGCTDVRKLDLDQIVKFQRHEVIVYDDESSKP
VVGEGLNKAAEVTLIVNIPNPTLGKVRVDQISYKLKQSAERQGATFISFDPDRGLWKFLV
PHFSRFGLCDDEAEDIAMDDAPGLENHVGQNGDMVADIDNEHQMETSEPELSHSLPAHLG
LDPEKMKEMRMLMFPSEDLDEREGFRDQTSLQMTSLTKRNLRPSQKNSQRNIHQDTPPVM
RKTPLALLEYNPGNDKSSPSSILMVQQNKNLAVRKSKMGGFELDISNVTPLTDNYSRNVV
DAALFMGRSFRAGWGPNGVLLHTGKPIGSSSSQRVLSSVINVEKIAMDKVVRDKKDTVKK
ELIDSTFEAPLSLHKKLDHEEEEVRFGSFSLKLKKVVTDRVVLPDICRSYIDILEKQLEV
AGLSTSAKLFSMHQVMVWELIKVLFSERQSTKRSNNAASDNEEDMMQDVKEESAEVDTEA
LPLIRRAEFSCWLQESVSHRVQEDVSDLNGSCYLEHLFFLLTGRELDSAVELAISKGDVR
LACLLSQAGGSTVNRNDIMQQLHLWGRSGLDFNFIEKERIKLYELLAGNIHDALHDLTID
WKRFLGLLMWHHLPPDSSLPAIFRSYQLLLDQEKAPWPVPIYIDEGPADGFLSNTKHSDL
LYYLMLLHSREEEEIGFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHAIDM
AFVAQLLSQGLCHWAIYVVLHIPYREDHPYLHVIVIREILFQFCETWSSMESQRQFIKDL
GVPSEWMHEALAVYYNYHGDFVKALDHFIECANWQRAHSIFMTSVAHSMFLSANHSEIWR
IATSMDDRKSEIENWDLGAGIYISFYLLKSSLEEDADTMAELDSLESRNESCRSFVGRLN
ESLAVWGDRLPVEARVAYSKMGEEICELLLSDLSVYGGRESQLSCFVTAFEAPLPGDVRS
SHLQDAVSLFSLYLSETGQTSA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctttctattcttccagctccagatatttcaaatttggactcgcgaaagaaa
agaaggatctctctagatgcaaatcctgtcgtatgtgaacattacaaagatatcagggat
tcattgcctacgttgaattcacctgactacttcttgaagccaagcatgaacgagctggtt
cagcgagaacttgaaaaccctgattattgcagccgggttcctgatttcacagttgggcgt
attggttacggttatatcaagtttctcggatgtacagatgttagaaagttagacctggat
cagatagttaagtttcaaaggcacgaggtcattgtttatgatgatgagagctccaagcca
gttgttggagaggggcttaacaaggctgctgaggtgactctgatcgtaaacataccaaat
ccaactttggggaaagtgcgagtcgaccaaatttcttataaattaaaacagagtgctgaa
agacaaggggcaactttcatctcctttgatcctgatagaggtttatggaagtttttggtt
cctcatttcagcagatttgggttgtgtgatgatgaagcagaagatattgctatggatgat
gccccgggtttggagaatcatgtaggacagaatggtgacatggttgctgacattgataat
gaacatcaaatggaaacttccgagccagagctttctcattctcttccagctcatctagga
cttgatcctgaaaagatgaaagaaatgagaatgctgatgtttcctagtgaagatctagac
gaaagggagggctttagagatcaaacttctcttcaaatgacatccttgactaaacgaaat
ctaagaccttcacagaaaaattctcaaagaaatattcatcaagatactccaccggtcatg
cggaaaactccgcttgctttgctggagtataaccctggtaatgataaaagctccccaagc
agtatcctgatggtccaacaaaataagaatctggcagtgagaaagtcgaaaatgggaggt
ttcgagctggacatcagcaatgtcacgccattaacggataactattcccggaatgttgtt
gatgcagcattgttcatgggaaggtcattccgagcaggctggggtccaaatggcgttctt
cttcacactggtaagccaataggcagttctagttcccagagggtattgtcttctgtgatc
aatgtagaaaagatagcaatggacaaggtggttcgggacaaaaaggatacagttaagaaa
gagcttattgactctacatttgaggctcccttaagtctccacaagaaattggatcatgaa
gaagaagaagttaggtttggctctttcagtcttaaacttaagaaagttgtcactgatcgt
gtggttcttccagatatctgccgaagctatatcgatatactcgagaaacagttggaggtt
gctgggttgtccacctccgccaagctgttttcgatgcaccaagtcatggtttgggaactt
ataaaagtgctcttttctgagagacagagtactaaacgctcgaataatgcagcttctgat
aatgaggaagacatgatgcaggatgtgaaagaagagtctgcagaagttgatacagaagct
cttccacttatccgaagagcagaattcagttgttggcttcaagaaagtgtcagtcaccgt
gtacaagaagatgtgagtgatctaaatggttcttgctaccttgagcacttattctttctt
ctaactggacgagagcttgattcagctgtggaacttgccatatctaagggagatgttaga
cttgcttgtttgttgagccaggctggtggatcaactgtaaaccgcaatgatatcatgcag
cagcttcacctttggggaaggagtgggctggattttaatttcattgagaaggagagaatt
aagctttacgaattgcttgctggtaatatccacgatgcgttacacgatttgacaattgac
tggaagagattcctagggttgttaatgtggcatcatctgcctcccgacagttcattacct
gccatcttcagaagttatcaactcctactagatcaggaaaaagctccatggcccgtccca
atatatattgacgaaggacctgcagatggctttctaagcaacaccaagcattctgatctc
ttgtattatcttatgcttctgcacagcagagaagaggaagaaattggtttcctgaagact
atgttcagtgccttctcttcaactgacgatccacttgactatcatatgatctggcaccac
cgaggaatcctagaagcagttggagctttcacttcagatgaccttcacgctatcgatatg
gcatttgttgcgcagcttctctctcagggcctttgtcattgggctatctacgttgttctt
cacataccctaccgcgaagatcatccatatctacacgtcattgtcattcgggaaatcctg
tttcaattctgtgaaacttggagttctatggaatcacagaggcaatttattaaggatctt
ggtgtcccttctgaatggatgcacgaagctctggcagtatattacaattaccatggagat
ttcgtaaaggctcttgaccactttattgaatgcgcaaactggcaaagagctcattccata
tttatgacgtcagttgctcattcaatgtttttgtcagctaaccattcagaaatatggaga
atcgctacttcaatggatgatcgcaagtctgaaattgaaaactgggacttgggcgctggg
atttacatatctttctatttgctaaagagttcactggaagaagatgctgatacgatggca
gaactggattcccttgagagcagaaacgagtcatgcagaagttttgtcggtcgtttaaac
gagtcattggctgtttggggcgatagattaccagttgaagctagagtggcatactcaaag
atgggagaggaaatctgcgagttgcttctgtcagatctgagtgtgtatggtggtcgagag
tctcagctaagctgttttgtgacggccttcgaagctcctttaccaggagatgtcagatca
tcacatctgcaagatgcagtgtctctcttctctctatatctctcggagacaggccaaacc
tcggcttag
DBGET
integrated database retrieval system
