KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10018372mg
Entry
EUTSA_v10018372mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10018372mg
Spliceosome [BR:eus03041]
 Complex B
  Other components
   Complex B specific factors
    EUTSA_v10018372mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 LisH_TPL Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 DUF7165 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_LRRK2 VPS8_N RMC1_N Beta-prop_IFT122_2nd Beta-prop_IP5PC_F Beta-prop_HPS5 PQQ_3 zf_topless
Other DBs
NCBI-GeneID: 18008469
NCBI-ProteinID: XP_006390516
UniProt: V4KDD4
LinkDB
Position
Unknown
AA seq 543 aa
MKNSQLKLLRLCLLLHSYLLRVSGENPLRLTMALEIEARDVIKIVLQFCKENSLNQTFQT
LQSECQVSLNTVDSVETFVSDINSGRWDSVLPQVSQLKLSRNKLEDLYEQIVLEMIELRE
LDTARAILRQTQVMGVMKQEQPERYLRMEHLLVRSYFDPHEAYGDSTKERKRAQIAQAVA
AEVTVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDTYPTTLNHTIK
FGKKSHAESARFSPDGQFLVSCSVDGFIEVWDYISGKLKKDLQYQAAETFMMHDDPVLCI
DFSKDSEMLASGSQDGKIKVWRIRTGQCLRRFERAHSQGVTSISFSRDGSQLLSTSFDTT
ARIHGFKSGKLLKEFRGHTSYVNNAIFTSDGSRIITASSDFTVKVWDSKTTDCLQTFKPP
PPLRGGEASVNSVHLFPKNTEHIVVCNKTSSVYIMTLQGQVVKSFSSGKKEGGDFVAACV
STKGDWIYCIGEDRKLYCFSYQTGGLEHFMMVHEKDVIGVTHHPHRNLLATYSEDCTMKL
WKP
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaaaaactctcaattaaaactccttcgcctgtgtctgctcctacactcttacctcctt
cgcgtctccggtgaaaacccactacgactgactatggcgctcgaaatcgaagctcgagat
gtaataaagattgtgcttcagttctgcaaagagaactccttgaatcagacgttccagaca
ttacaaagcgagtgccaggtttccttgaacacagtagacagcgtcgagacgtttgtctct
gatattaatagtggaagatgggactcggtacttcctcaagtgtctcagcttaagctttcc
aggaataaactagaagacctttacgaacagattgtactggagatgatagaacttcgagaa
ttggacactgcccgagctattttgaggcaaactcaggtgatgggtgtcatgaagcaggag
caaccagaaagatatttgcggatggagcatcttctagtcagaagctattttgatccgcat
gaggcctatggagactcaactaaagaaagaaaacgtgcacagattgctcaagctgtggct
gccgaggttactgtggtaccaccttcacggttaatggctttgataggtcaggctctgaag
tggcaacaacatcaaggcttactccctccaggaactcagtttgacctctttcgtgggacg
gcagctatgaaacaagatgtagaagacacatatcctactactcttaatcatacaataaag
tttggtaaaaaaagtcatgcggaaagcgctaggttttcaccagatggacagtttcttgta
tcatgttctgttgatggttttatcgaggtatgggactacattagtgggaaactgaagaag
gatttgcaatatcaagctgctgaaacattcatgatgcatgatgatcctgtcctttgcatc
gactttagcaaagattcagagatgcttgcatctgggtctcaagatggaaagattaaggtc
tggcgtataaggactggtcaatgcctgcgtcgttttgagcgtgcacattcccaaggagtt
acaagtatttccttctctcgggatggaagtcaattactgagtacctcctttgacaccact
gcaagaatccatggttttaaatctgggaaattgttgaaagaattccgcggtcatacgtct
tatgtaaataatgccatctttacaagtgatggaagccgtataatcactgcctccagtgat
ttcacagtgaaggtctgggattcaaagacgacagattgtctacaaacattcaagccacca
cctccattaagaggaggggaggcatcagtcaattctgttcatctgttccccaaaaacaca
gaacacattgttgtgtgcaacaagacatcatctgtatacatcatgacactccaaggacag
gttgtgaagagtttctcatccggtaagaaggaaggaggagattttgtagcagcatgtgta
tctacaaaaggcgattggatatactgcattggtgaagacaggaaattgtactgcttcagt
tatcaaaccggtggacttgagcattttatgatggtgcatgagaaagatgtgataggcgta
acacaccacccacatagaaaccttctcgcaacctatagtgaagattgcaccatgaagttg
tggaagccctga

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