Eutrema salsugineum (saltwater cress): EUTSA_v10018400mg
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Entry
EUTSA_v10018400mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10018400mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10018400mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10018400mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10018400mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
EUTSA_v10018400mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
EUTSA_v10018400mg
DSBR (double strand breaks repair)
Other DSBR factors
Others
EUTSA_v10018400mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
18009065
NCBI-ProteinID:
XP_006389827
UniProt:
V4KIP2
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MATEYERKRLENIRRNDEMMVALNVRAKASLLSAATKRPRDESKSFQKKKKKPTKSETPI
VIRKSLRTRGLNPDSGGLPDGFSDYPNRMAPPPPPDKSSSRLLAPLPFDAAYGGDDSHKN
FVETILGIARKSMSCGGKLVKGETGSVKDENESPMVNTRSSARLSNVVAKKEEPDSSIDY
VKKEVFEVGFPVKPEEIEFGGGFDTGSLSLEPHNVARVVPGRILVVKFLPCENVKLIAAG
DKLGHVGFWNLDCQDEEDDGIYLFHPHSAPVSSLVFQQNSFSKVISSSYDGLIRLMDVEK
LVFDLVHTSDDAIFSLSQRPNDEQSLYFCEGYGMLNIWDLRAGKSLFQWDLHDHRINSID
FNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLTTVNHARAVHSAYFSPSGLSLATTSV
DNHLGILSGANFEDTSMIYHDNITNRWISTFRGVWGWDDSYVFVANRSKGIDVISPKLKR
TVKELQNPLMRAIPCRIHCHPLNVGMLAGATAGGQVYVWTTK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagtacgagcgaaaaagactggagaacattagacggaacgatgagatgatg
gtggctctcaatgtccgcgccaaagcctctcttctctccgccgcaaccaaacgccctcga
gacgaatctaaatcatttcagaagaagaagaagaagccgaccaaatccgaaacgcccatt
gttattcggaagtctctgcgcaccagaggcttgaatcctgattccggtggcttacccgat
gggttttcagattatcccaatcgtatggctcctcctcctcctcctgacaagtcatcgtct
cgtctattggctcctctgcccttcgatgcggcttatggtggagacgattctcataagaat
ttcgttgagactattttgggtattgcgagaaagtcgatgtcttgtggaggaaaattggtt
aaaggagaaactggatcggttaaggatgagaatgagtctcctatggtgaacactaggagt
tctgctcgcttatctaatgttgttgccaaaaaggaagagccagattcatctatcgactat
gtgaagaaggaagtttttgaagttggttttccagtgaagcccgaggaaattgagtttggg
ggtggttttgatacgggatcgcttagtttagaaccgcataacgtagcacgtgttgtgcct
gggaggattttggttgtaaagttcttaccttgcgagaatgtgaagctgattgctgcaggg
gacaaacttgggcatgttgggttttggaatttggattgccaggatgaggaagatgatggg
atttatcttttccatcctcatagcgccccagtttcatctcttgtctttcaacaaaactct
ttctcaaaggttattagcagcagctatgatggtcttatccggttgatggatgttgaaaag
ttggtttttgatctggttcatacgagcgatgatgctatattttccctctcgcagagacca
aatgatgagcaaagcttatacttttgtgagggatatggaatgttgaatatatgggacctc
cgagcaggaaagtcattgttccagtgggatttgcatgaccacaggatcaattctatagac
ttcaacccgcagaatccccatgtcatggctacaagttccacagatgggactgcttgcctt
tgggacctgagaagcatgggagccaaaaaaccaaaaacattgacgactgtgaatcatgct
agggctgttcactctgcttatttttcaccttctggcctttcacttgcaacgacgagcgtt
gacaaccatcttggtattctaagcggcgccaattttgaggatacttccatgatatatcac
gataatattaccaataggtggatctccactttcaggggagtatgggggtgggatgattca
tatgtctttgttgccaatcggtcaaaaggaattgatgtaatatctccaaaactaaagcgt
acggtgaaggaattgcaaaaccctcttatgagagctattccatgcagaatccattgtcat
cctctgaatgttgggatgcttgcaggagccaccgctggagggcaagtgtatgtttggaca
acaaagtag
DBGET
integrated database retrieval system
