Eutrema salsugineum (saltwater cress): EUTSA_v10018512mg
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Entry
EUTSA_v10018512mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10018512mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EUTSA_v10018512mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EUTSA_v10018512mg
Prokaryotic type
EUTSA_v10018512mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18008089
NCBI-ProteinID:
XP_006390236
UniProt:
V4KCN9
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MSTTTTDDETDLSCGGDGTEPRIPKYKRRKVAIIFAFCGVGYKGMQRNPGAKTIEGELEE
ALFHAGAVSESERGKPKLYDFARSARTDKGVSAVGQVVSGRFYVDPPGFVDRLNSNLPDQ
ITVFGYKRVSRSFSSKKMCDRRRYVYLIPVFALDPVSHRDREAVMASLGSGEEYVKCFEC
SERGRKNKIPGVAAICKSTNFDTESSELGTEMKSEALSFDLSNRENSLSLVDDVQVARIH
EDGCKKESAEKMNGEGVKMAEETKSKFCYGDEEKERFSRILSYYVGSYNFHNFTTRMKAD
DPAAKRCIISFTAKTVINLDGIDFIKCEVIGQSFMLHQIRKMMGLAVAIMRNCAPESLIQ
TAFSKDVNITVPMAPEVGLYLDECFFTSYNTKFEDSHEEVSMEAYKEEAEAFKLKYIYSH
IGSAERKYGSVALWLHSLNYRNYPDLNYGSHGHNTASSCL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaccaccaccgacgacgaaacagacttgtcctgcggcggagacggcacggag
cctcgaataccgaaatacaaacgcagaaaagtcgccattattttcgcgttttgcggtgta
ggatacaaagggatgcagaggaatccgggcgcgaaaaccattgaaggagagctcgaagaa
gccctgttccatgccggagctgtatcagagtctgaaagaggaaagccaaaactatacgat
ttcgcacgatctgcacggaccgataaaggagtgagtgctgtgggacaagttgtttccggt
cgcttctacgttgacccgcctggattcgtggatcggctcaactccaacctccctgatcag
atcacagtgtttggctacaagcgtgtatcccgatcgtttagctcgaagaagatgtgcgat
cggaggaggtatgtgtatctgattccagtgtttgctcttgatccagtttcgcatcgtgat
agagaagcagtaatggctagtttgggttcgggagaggaatatgtaaagtgtttcgagtgt
tcagagagaggtcgtaagaataagatccctggtgttgccgcaatttgcaaaagcactaat
tttgatacagaatctagtgaattaggaactgagatgaagagtgaagctttgagttttgac
ttatctaatagagaaaatagcttaagcttagtagatgatgttcaagtagctaggatacat
gaagatggttgtaaaaaagaatctgcggagaagatgaacggtgaaggagttaaaatggct
gaggagacaaagagtaagttttgctatggcgacgaggagaaggagagattcagtagaata
ctgagttactatgttgggtcatataatttccacaacttcactacaagaatgaaagcagat
gacccggctgctaagcgatgcattatctccttcactgcgaaaactgtcattaaccttgat
gggattgacttcatcaagtgtgaagttataggccaaagcttcatgcttcatcagatccgg
aagatgatgggtcttgctgttgcaatcatgaggaactgtgctcctgaatcactaatccag
actgctttcagcaaggatgtgaatataactgtaccaatggcaccagaagttggactctac
ctcgatgaatgcttcttcacgtcttataacacaaaatttgaagacagtcatgaggaagtg
tccatggaagcatacaaggaagaagctgaagcatttaaactgaagtacatctattctcat
attggctctgccgagagaaaatatggatccgtggctctttggttgcattccttgaactat
agaaactatcctgacctaaattatggcagtcatggacataacacagcaagttcttgtcta
taa
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