Eutrema salsugineum (saltwater cress): EUTSA_v10019185mg
Help
Entry
EUTSA_v10019185mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10019185mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10019185mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EUTSA_v10019185mg
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
EUTSA_v10019185mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
S1
Motif
Other DBs
NCBI-GeneID:
18009237
NCBI-ProteinID:
XP_006391337
UniProt:
V4KMU5
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MSDIVTPGDVLGNATEFKAGKGAYVNDNTIYASLTGSRRIVSPLPDSPDQRAIVEVTGHK
AHGLIPETGSVVTGRVTKVTARMASVDILCVGPKAVHEKFAGIIKQHDVRATEVDKVDML
LSFRPGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQT
EQRKVAKVG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatagtaacaccaggagatgtactcgggaatgcgactgagttcaaagccggg
aaaggagcttatgtcaacgacaataccatctacgcttcccttacaggatcacgccggatt
gtttctcctcttccggattcacctgaccagagagctattgtggaagttacaggtcacaag
gcacatggacttatcccggagactggttctgttgtcacaggaagggttactaaagttaca
gctcggatggcttctgttgatatcttgtgtgttggtccaaaggctgttcatgaaaaattc
gctggcataatcaagcaacacgatgttagagcaacggaggtcgacaaagttgatatgctt
ctgtctttccgtcctggtgacattgttagagctatggttctgtctcttggtgatgcaagg
gcttactacctgtctactgctaagaatgagcttggtgtggtctcagcagaaagtgcagca
ggtgaaacaatggttccgattagttggacagagatgcagtgcccattgtcgggccaaacc
gagcagagaaaagttgccaaggtcggttag
DBGET
integrated database retrieval system
