Eutrema salsugineum (saltwater cress): EUTSA_v10019871mg
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Entry
EUTSA_v10019871mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10019871mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10019871mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EUTSA_v10019871mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
Sgf11_N
Motif
Other DBs
NCBI-GeneID:
18023497
NCBI-ProteinID:
XP_006407935
UniProt:
V4MAB2
LinkDB
All DBs
Position
Unknown
AA seq
2205 aa
AA seq
DB search
MSSSLASQLQAIKSVVLADTEPSKRPYTRPSILFSPKEAADFDIESIYELGLKGLEVLGN
KDERFKNFMNDLFSHKSRETDRELLGREENARIDASISSFLRLLSGYLQFRASLETLEYL
IRRYKIHIYNLEDVVLCALPYHDTHAFVRIVQLLSTGNTKWKFLDGVKNSGAPPPRSVIV
QQCIRDMQVLESLCDYASRTKKYQPSKPVISFSTAVVVEVLGSVATVDGDLVKQILPFVD
SGLQSAVKGCLDQQAGALMVVGMLANRAMLNENLIKRFMRSIIDIAREHAKDSSDPHWLR
LSFMALINFVQLQSVVLIPKKVLDLLKEIRDISGVLLGLSKEFNIKRFLAVLLDSLLLYS
SSDDQCRQTLVSIIDNVPINNLVDHLISKVFSMCMTQYQKNSDFTSSASGSWAKKILVVV
RNKYPVELRAAVQKFLEDTKVLSKKEDLKLEIVSCMLDGNTDMSQPFLDSKLWFRLHHPK
AAVRCAALSSLNSVLKADRSKAENLVTIQDAILRQLWDDDLAVVQAALSLDQLPNIVTSS
SLLDALLHVVKRCVGILLSGVSHNAQLAADVVALSLKIAVSRFCNQAESTEKVTSAMFPF
LLIQPKTWKLNLHVLKLGKDINWPLFNNLVADDGMKKLPDIMTGNISSISMDIINNLGEA
LSLDPDERRIELIESACSFKLSEVLESCGSIKLTEQERNKLQKGLLIRESVSALNMEIVN
KLVDAFMMHPGDVIQWLTVSCQDAPLSKTLFFMMLMQSLLKVYSSSDPSKFLDLFEMCFP
ALKTEWEEAEVAVDVSLKELSKSNCQELLYQLFDTSDFTALNSKLLICLFWKLVESFIKL
EPAHVSSGFSRRLCSGLEDMFFFFATTRSRHVFKEHLHYRVREAKVCPVLFLTRLISRED
VPPMVQIDSLNCFLYLCSNGNSEWSIQIFSSFPVLLVPMSSDNQDLKVAAMNCIEALFDL
RCRSDSSKKNGSAAICSNSFDELLGMIVQQRRLLLSDYKFLPSYLTSLLSSTHNDLLVPV
DLQKRFDQPTKDNILSFILLCAQELPAYGKLRVLSLLKGLGIMLLHDENVKTLSQLLDKR
SQYYLKLDKDSQPISDTEVALLCLLLECSMMRSASFKGQSVDDHILNALKMDRVASEHPA
VISPCLTILEKISNQFYAELKTEVQIRFFHNLVSLFRSTNGRIQHGAKEAVLRLNISCST
VVHVIDHITQQDNLVIDSLSKRKKQKRDSKSCLEEDVNVVELLRGEKALCFIASLLDMLL
LKKDLAHRESLVGPLFKLLGRSKSNDWVQIGSSAEETSVQPPQDVASISSIQQTVLLILK
DIFDSLNTNPVKADITNEINVKMLVEFAHSSNDGVTRNYIFSLFTSIVQIVPDRVLDHII
SILTLVGESTVTQIDSHSKSIFEGFISSVIPFWLSKTKSEEKLLQIFVNVLPDIVEHRRR
SIVAYLLGVIGEQNGLPSLLVLLFQSLIARKDSAWLGNAQNSERFTSVVKKEWEYSFAVE
ICEQYSSSTWLSALVTLLQTISKDSFTKECFFQMRLVLEFIFQKLQDPEFAFKVSLEPRT
NVSDGIQQELQELMKGCMFLLQAVDSTNEKDVTSAVRKEIRMRIHDILMTVTGAMDLSIY
FRVVTSLLQQQSDRNGTKKILGLISERAKDTSSSKLKHKRRLPNQKRRNPWLNLDDAAVE
SFGKMCEEIVHLIDETDDESGVPAKRAAISTLEVLASRFPSGHPIFSKCLASVAEGISSK
NLGVSSSCLRTTGALINVLGPKALVELPRIMKNLVKQSHEVSSALKSGGTATVEEQLLML
SVLVTLEAVVDKLGGFLNPHLGDIIRLMVLHPEYVSDFDKNLKSKANAIRRLLIDNIPVR
LTLQPLLRVYNEAVISGNASLVIAFDMLENLVAKMDRPSIVCNHAKIFDQCLVALDIRRQ
NPAAIQNIDEAERSVTNAMVALTKKLKESEFKPLFIRSIEWAESDIVDGSRSENKSIDRA
ISFYGLVNRLCEIHRSIFVPYFKFVLDGIVLHLTSAETSVSTRKKKKAKIQEAYDTIPPK
SWHLRTLVLSSLKNCFMHDTGSLKFLDTNNFQVLLKPIVSQLVVEPPSSLMEHPYMPSVE
EVDDLLVSCIGQMAVASGSDLLWKPLNHEVLMQTRSDKVRSRILSLRSVKQMLDNLKEEY
LVLLAETIPFLGELLEDVELSVKSLAQDIIRQMEEMSGESLAQYL
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgctagcgtcgcagttacaggccatcaagtcggttgtactagccgataca
gagccttcgaagagaccctacacacgcccttcgatcctcttcagtcccaaagaagcagca
gatttcgatatcgagtcaatttacgaactcggacttaaaggtctagaagtgcttggaaac
aaagatgagaggtttaagaacttcatgaatgatttgtttagtcataaaagtagagaaact
gatagggaattactgggtagagaagaaaatgctcggattgacgcatcaatcagctcgttt
ctacgcttactctccggttatctccagtttcgagcttccttggagacccttgagtatctc
atacgaagatacaagattcatatatacaatttagaagatgtggttttatgcgctttgcca
taccacgacacacatgcatttgtccgtatcgttcagctgctttcgactggcaataccaag
tggaaatttctggatggtgtgaaaaattctggtgctccacctcctagatcggttattgtt
cagcagtgcatacgtgatatgcaggttttggagtccttgtgtgactatgcatctcggact
aagaagtatcagccttcaaaacccgtgatcagcttctccacagctgttgtcgtcgaggtt
ctaggttctgttgcaacggttgacggtgatttagtaaagcaaattttaccatttgtcgac
tctggtcttcaatctgctgtgaaagggtgtttagatcagcaggctggtgcgttaatggtt
gttgggatgttggctaacagagccatgctgaatgaaaatcttattaaacgctttatgagg
tcaatcatcgacattgctcgtgaacatgcgaaagattcctctgatcctcattggcttcga
ttgtcatttatggcattgattaattttgttcagttgcaatctgtggtcttgattccaaag
aaagttttggaccttttaaaggaaataagggatatttccggtgttcttcttggattatcc
aaagagttcaacatcaagagattcctggccgtgttactggattctcttcttctctacagt
tcttctgatgatcaatgtcgtcaaactttagtttcgataattgataatgttccaataaac
aacttggttgatcatttgatctccaaggttttctctatgtgtatgacacaatatcagaag
aacagtgattttacatcttctgcatctgggagctgggccaagaaaattctggttgttgtt
agaaataagtatcctgttgaattacgtgcagcagttcaaaaatttctggaggatactaaa
gttctttcgaagaaggaggatttgaagttagagattgtttcttgtatgctggatggaaat
acagacatgtcccagccattcttggattcgaaattgtggttccggctccaccatcccaag
gctgctgtacgttgtgctgcactctctagtcttaacagtgttctcaaggctgatagatct
aaggcagagaaccttgtcacaattcaggatgctatactgcgccagctttgggatgatgat
ctggctgttgttcaggctgccctgtctcttgatcagttgccgaatatagtaacctcttct
agtcttctggatgctttgcttcatgtggtgaaacggtgtgttgggattctgttatcagga
gtatcacataatgctcaactcgcagctgatgtcgttgctttgtcccttaaaattgccgtc
tcaagattctgtaatcaagcagaatctactgagaaagtcacctctgcaatgttcccattt
ctcttgattcagccgaagacttggaaattaaaccttcatgtgctgaaattggggaaggat
attaactggccacttttcaacaatcttgttgctgatgatggaatgaaaaagctccctgat
atcatgactggaaacatatcctcaataagcatggatattatcaataatttgggggaggca
ctgtccttggatcctgatgagcgtaggattgagctaattgagagtgcttgtagctttaag
ctctctgaagtattggaatcatgtggcagtatcaaattgacagaacaggaacgcaacaag
ttgcagaagggactgttgatccgtgaaagtgtgtccgcattgaatatggaaatcgttaac
aagctggtggatgcgtttatgatgcaccctggtgacgttattcaatggcttactgtcagt
tgccaagatgcacccttgtcaaagacgctgttttttatgatgttgatgcagtcattgctt
aaggtgtattcttcatctgaccctagtaaatttttggacctttttgaaatgtgctttcct
gctttaaagaccgagtgggaagaagctgaagttgcggttgatgtttctttgaaagagctg
tcgaaaagcaactgccaagaactcttatatcaactttttgacacttctgattttactgca
ctgaattcaaagcttctgatctgcttgttttggaagttggtcgagtcattcattaaactt
gaaccggcccatgtctcttcgggttttagcagaaggttgtgtagcggacttgaggacatg
tttttcttttttgcaacaactcggtcacggcatgttttcaaggaacaccttcactaccgt
gtgagggaagccaaagtctgtcccgttttgtttctcacccgacttatatcacgagaagat
gttcctcctatggtccaaattgatagtctcaactgctttctttatctttgctccaacggg
aatagtgaatggtcgattcaaatattctctagctttcctgtccttttggttcccatgtca
agtgataatcaggaccttaaagtagctgccatgaactgcattgaggcgctcttcgaccta
cggtgtcgttccgactctagtaaaaagaatgggagtgctgcaatctgtagtaattctttc
gatgaactgttgggaatgattgttcaacaaaggaggcttttattgtcggactataagttt
cttccatcctacctgacatcgttgctcagttcaacccataatgacttactagtgccagtt
gacctgcagaaaaggtttgatcaacccacaaaagacaatatcctttccttcattttattg
tgtgcacaagaacttcctgcttatggaaagctaagagtcctatcattgctaaaaggtctg
ggcatcatgcttctgcatgatgaaaatgttaagacattgtctcaacttcttgataaacgt
agtcaatactacttgaaattggacaaagattcccagccaatatctgacactgaggtcgct
ttattgtgccttcttctggagtgctccatgatgcgttcagcgtcgtttaaagggcaatct
gttgatgatcatatactgaacgcattgaaaatggatcgtgtggcatcagaacatcctgct
gttatatctccatgtcttactattttggagaagataagcaatcaattttatgctgaactg
aaaaccgaggttcagattcgtttcttccacaatctggtttctctgtttcgaagtacaaat
ggtagaatacaacatggtgccaaagaggctgtcttacgcctgaatatttcttgttcaaca
gtggtccatgtcattgatcatatcactcaacaggataatcttgttattgattctttgagc
aaaagaaagaaacagaaaagagattcgaagtcatgtttagaagaagatgtaaatgttgtg
gaacttctaagaggagaaaaggctctctgtttcattgcctcgttacttgacatgctgctt
ctaaagaaagatctagctcacagggagtcccttgtaggaccattgtttaagctcctagga
agatctaagtctaacgattgggtgcaaattggttcttccgctgaggaaacctcagtccaa
cctcctcaggatgttgcctccatatcttccatccaacagacagtgctcttaatcctgaaa
gatatttttgattctctgaatacgaatcctgtgaaggctgacataactaacgaaatcaat
gtcaaaatgctggttgagtttgctcattcatcaaatgatggagttacacggaactatatc
ttctccctcttcacatctattgttcaaattgtcccagacagagtcttggaccatattatc
agcatacttacacttgttggtgaatcaacggtgacacagattgatagccactcgaagtct
atctttgaggggtttatatcatcggtcattccattttggctgtctaagactaagagtgag
gagaagttgctgcagatttttgtgaacgtgttgcctgatattgttgagcatagaagacgt
tcgattgtagcttacctgctgggagttataggtgaacaaaatggcttgccttctttgctt
gttctcttattccagtccttgattgcaaggaaagactcagcttggcttggtaatgcccag
aattctgaaaggtttacttccgttgttaagaaggaatgggagtattcttttgccgtggaa
atatgcgaacaatattcttcttcgacatggctctcagctctggtcacgcttcttcaaact
atcagcaaagacagttttactaaagaatgtttctttcagatgcggcttgtcttagaattt
atattccagaagttgcaagacccagaatttgcatttaaggtgtcacttgaaccaagaact
aatgtttcagatggcattcagcaagaactacaggagcttatgaagggttgtatgtttcta
ctgcaagctgttgattccacaaacgagaaagatgtgacttcggcagttagaaaggaaatc
agaatgcgtatacatgatatcttgatgactgttacaggagccatggatctgtctatatat
ttcagagttgttactagcttgcttcagcagcagtcggaccgtaatgggacaaaaaagata
cttgggcttataagtgagagagctaaggacacctcttcttctaaactgaaacacaagagg
aggctccccaatcaaaaaagaagaaatccttggcttaatttggatgacgctgctgttgaa
tcttttgggaagatgtgtgaggagattgtgcatctaattgatgagactgatgatgagtca
ggcgttccggctaaacgagctgctatttctacactggaagttttggctagcaggtttccc
tctggtcatccaatcttcagcaagtgccttgcatctgttgcggaaggcatcagctcaaag
aatttgggagtttcttcaagctgccttcgtacaactggtgcattgatcaatgttcttgga
ccaaaggcgctcgttgaacttccacgcataatgaaaaatttggtgaaacaatcgcatgaa
gtatcttctgcattgaagagtggtggaactgcaacagtcgaagaacagttacttatgctg
tctgttctagtcactttggaagcggtggtagataaacttggaggtttcctaaatcctcat
cttggggatattattagactcatggtgctacatcctgaatatgtctctgactttgacaag
aatctcaagtccaaagcaaatgccattaggagactccttattgataacataccagttcga
ctaactctgcaacctcttctacgagtatacaatgaggctgttatttctgggaatgcaagt
ttagtgattgcttttgatatgctagaaaatcttgttgcgaaaatggatagaccatctatt
gtttgcaaccatgcgaagatttttgaccaatgcttagttgcccttgatattcgacgtcaa
aatccagcagcaatccagaacattgatgaagctgagagaagcgtaactaatgcaatggtt
gcactcacaaagaagctaaaggagtctgagttcaaacccctctttatcaggagtatagaa
tgggcagagtcagatattgtagacggatcacggagtgaaaacaagagcattgaccgagct
atatctttctatggtctggtgaatagactctgtgagattcacaggtccatctttgtacca
tatttcaaattcgtgcttgatggtattgtattgcatctcaccagtgccgaaacatcagtt
tcaaccaggaagaaaaagaaagccaaaattcaggaagcatatgacactatcccaccaaaa
agctggcatcttaggacactggtgctgtcttccttgaagaattgctttatgcatgatact
ggaagcttaaagtttctcgacacaaataacttccaggtgctactgaagcctatagtctca
cagctagttgttgaaccgccatcttcgttaatggagcatccatatatgccatctgtagaa
gaggttgatgatttattagtttcttgcataggtcaaatggcagtagcctctggctctgac
ctcctatggaagccgttgaaccacgaggtgctaatgcaaacaaggagtgacaaggtgcgt
tcgaggatattgagcttgagaagtgtaaaacagatgctggacaatctgaaagaagagtat
cttgtgttgctcgctgaaaccattccattcttgggtgaactactggaagacgttgagctc
tctgtcaaatctttggctcaagatatcatcagacagatggaagagatgagcggtgaaagt
ctggcgcaatacctctga
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