Eutrema salsugineum (saltwater cress): EUTSA_v10019942mg
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Entry
EUTSA_v10019942mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K19022
AP-5 complex subunit beta-1
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10019942mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
EUTSA_v10019942mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
18025351
NCBI-ProteinID:
XP_006406446
UniProt:
V4LVN6
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MTMTPEKSPARPLSVQDWDVLIEDFQNAGSPRDWFTTVFSIDSLVDFALSSLLKKEFPSP
VKLSILVFLDEFSEVLFEKCGSETFDRFIDALRAIVQSPTDGSSGLKEQAMISFTSVLVS
IDSFSLRHVESVVDLLLALVNRPNHGFDRQARAIACECLRQLEKAFPGLLSDVAGHLWSL
CQTERTHAVQSYLLLFTTVVYNVVNQKLRVSLLSTSVPLVPFNAPNWMRDESSHSGQGQS
QGLGPDQKELRRTLAFLLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYS
FDPMLCHVVLLMYSKFPDAFEGQEKDIMRRLMLLSKETQIYLVFRLLALHWLMGLLNKLM
LSGELEKRKSVLEMGRKFHPVVFDPLALKALKLDLLVQCSVSSNAFSGGDNSKSAAGLLQ
DCLVSVSDFKWLPPWSSETALAFRTLHKFLICSSTHSDSDPSTSISLMESSLFQNLQGLL
VDMTLEFQILVPVVVAFIERLINCQKHQWLGERFLQTIDEKLLPKLEKNNLLTACFPLFH
RIAENDTIPPYRLMELLTKFVVSLVNKRGFDVGLKLWDQGTEVLGICRTLLSHHKSSRLF
LGLSRLLSLMCLYFPDLEVRDNARIYLRMLVCIPGRRIKNILKPADAVSTSTHPSTFFNV
QSPRFRHDPNKSWNLSSYIHLERVTPLLVKQSWSLFLPSVGVGNDGYSIIESKIQVDEVE
PDSSQELQILPEFRRIESGKPTLRVMDAKIAEILERLRRYFSVIPDFRHMPGIKVRITCA
LRFDAETYSSIWSGQTQSTELEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPNW
NKNAHNEEGSLDIVLLENTPKEEEQNGLRGVPVTVELEPREPTPGLVEVSMEANAENGQI
IQGKLESVPVGIEDMFLKALAPPDEPEDTIPGYYSDLFNALWEVCGSSSSTAHETFALKG
GKTAAAISGTRSVKLLEVPAETVVEASELHLAPFVVAITGEQLVNIVREGGIIENIVWQE
EEEDEGDHANAGRSTSSSVGFNRGPLRLTYIGYGDDQEVPMTRSRGKLGKIKMLMFLPPR
YHLLFEMEVGEGSTLVHIRTDHWPCLAYVDDYLEALFLQ
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacaccggagaagtctccggcgagaccactctctgtccaggattgggacgtt
cttatcgaggatttccagaacgccggctctcctcgcgactggttcaccaccgtcttctcg
attgattctctggtggacttcgctctctcttctctcctcaaaaaggaatttccttcgcca
gtgaagctctcaatcctcgtctttctcgacgaattttccgaggttttgttcgagaaatgc
ggtagcgagacttttgatcgattcatcgatgctcttcgtgcgatcgtgcaatctccgacg
gatggatcgtccggattgaaagagcaggctatgatctctttcacgtcggtgcttgtttcg
attgattctttctccctacgtcacgttgaatcagttgtcgacttgctcctcgcgctcgtt
aatcgtcccaaccacgggtttgaccgacaagctcgtgccatcgcgtgcgagtgcttacgc
cagctcgagaaagcttttcctggtttgctctccgatgtcgctggccatctttggtcgctg
tgccagacggagagaacccacgccgtgcaatcttaccttctcttgttcaccactgttgtt
tacaacgtggtcaatcagaagctcagggtttcacttcttagtacctctgtgcctcttgtg
cctttcaatgctcccaattggatgcgggatgagagttcacattctggtcaaggtcagagt
caggggttggggccagatcagaaggaacttagacgaacactggcttttcttttggaatcg
ccgtatctattcacgtcttgtgctatgatggagtttatgggaatggtggtgccacttgca
tcggcattggagttacaggcctctatgctgaaagttcagttcttgggcatgatttattcg
tttgatcctatgctctgtcatgttgtcttacttatgtattctaagttccctgatgcgttc
gaaggacaagagaaagatatcatgagacgtcttatgctcctctccaaggagactcagata
tatcttgttttccgcttgcttgcgcttcactggttaatgggtttgttgaataagcttatg
ttgagtggggagcttgagaagaggaaatcggtactcgagatgggtcggaagtttcatcct
gttgtttttgatcctctcgctttgaaagcgttgaagcttgatctactggtacagtgctct
gttagttccaacgcttttagtggaggtgataacagcaaatctgcagcgggtttattgcag
gattgcttggtatctgtttctgatttcaaatggttgcctccttggagctcagaaactgcg
ttagcattccgtacgctacacaagtttctgatatgttcatctacacattccgactctgac
ccttccacttctataagtcttatggagtccagccttttccaaaacttgcaggggttgctg
gtggacatgactttggagtttcaaatcttggtccctgttgttgtggcttttattgagcgg
ttgataaactgtcaaaagcatcagtggttaggagagcggtttcttcagacaatcgatgag
aaactgcttcccaaacttgagaaaaacaatttattaacagcttgcttcccgcttttccat
cggattgccgagaatgatacaatacctccttatcgtttgatggagttgcttacgaagttt
gtggtttcacttgttaataagcgcgggtttgatgtgggattgaaactgtgggatcaaggg
actgaagttcttggcatttgtcgaacactgttgagtcaccataagagctctagattgttt
cttggactctctcgccttctttctctcatgtgtctctatttccctgatctggaggtccga
gacaatgctaggatatatctgaggatgctagtctgtataccaggacggaggataaagaac
attttgaagcctgcagatgccgtctctacatcaactcatccatctacgttctttaatgtc
caaagtcctcgttttcgtcatgatcctaacaaatcttggaatctttcatcctatattcat
cttgaacgggttactcccctactcgtgaaacagtcatggtcgttgtttctaccatctgta
ggtgttggaaatgatggatatagcattatcgaaagcaagattcaggtagacgaagttgag
ccggatagcagtcaagaactccagattttgccagaatttcgaagaattgaatcagggaag
cccacattgagggtgatggacgcaaagattgcagaaatccttgaaaggttaagaagatat
ttctcagtgattcctgattttagacatatgcctggaatcaaggtgaggataacttgtgct
ttgagattcgatgctgaaacatatagcagcatatggagcggtcaaactcagagtaccgag
ttagaaaaagtcgactcacctcctgcgatattcgcgaccgtgctcaaattctcatcttca
gcaccttatggttctattccatcgtgccgcatacctttcctcctcggtgagcctaattgg
aacaagaatgcacacaatgaagaaggttctttggacatcgtcttgttagaaaacacaccg
aaagaggaggaacaaaatggcttgcgaggagtacctgtaacagttgaattggaacctaga
gaaccaacaccgggtttggttgaggtttccatggaagcaaacgcagagaatggccagatt
attcagggaaaactcgagagtgttcctgtggggatagaagacatgttcctgaaagctctt
gccccacccgatgagcctgaagatacaataccgggctactactcagatctattcaatgct
ttgtgggaagtgtgcggttcttcatccagcaccgcacatgaaacatttgcattaaaagga
ggcaaaaccgctgcagcaatcagcgggactcggtcagtgaaactgcttgaagtccctgca
gaaactgttgtagaggccagcgagcttcacttagcgccctttgtggtagctatcactgga
gaacagttggtgaacattgtaagagaaggaggaatcatcgagaacattgtgtggcaggag
gaagaagaagatgaaggggatcatgcaaatgcaggccggtctacttcctcctcggtggga
tttaaccgaggccctcttcgtctgacatacattggatatggagatgatcaagaggttcca
atgacgaggagcagagggaaattgggaaagataaagatgctgatgtttctgccgccgaga
tatcatctgctgtttgaaatggaagttggtgaaggatcgacattggtgcatataagaaca
gatcattggccttgcttagcttacgttgacgattacttagaagctttgtttttgcagtag
DBGET
integrated database retrieval system