Eutrema salsugineum (saltwater cress): EUTSA_v10019956mg
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Entry
EUTSA_v10019956mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10019956mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10019956mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10019956mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10019956mg
Spliceosome [BR:
eus03041
]
Complex A
U1 snRNP components
U1 related factors
EUTSA_v10019956mg
Complex B
EUTSA_v10019956mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10019956mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18023503
NCBI-ProteinID:
XP_006407941
UniProt:
V4LZT7
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MATTEAAPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNITQYERPSAPAPPLP
AGAPPHSSTTPKLAQIPIPSARQGHQAQLEQAKPVGHASQPHGLQQQPPQFPSQHVRPQI
MQQQPPGQQMPQQFPQQQSQSMVQQPHGHPSLQTYQPTPPQQQQAMPQQLNHQYAHSQQQ
YMGYRPYMQPQGLQNSHHTPQVGPQTQQFPSQPEYNSLALKREGDEFQGGKKTGFSQPHL
HNVEGSPSHNTPFEAKAASQRTNANLALAQQYNGPQANMQPPSTVTQFQQPGANLVHQQL
GPRPPNHMDPMLHQKSHASPFRSNNTYDNNLQSRPGNDPYVNARMEGPVRGTQPLHPAAM
PKDIRIGGGPPANADPATGQTGHGTYRHAGPAFPTEGRPHFVTPSDVPHLSPVEIYLKQH
EVSTTGENIPAPFITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAVAKT
GSGKTLGYLIPAFILLRHCRNDPRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCL
YGGAPKGPQLKELERGADIVVATPGRLNDILEMKQIDFQQVSLLVLDEADRMLDMGFEPQ
IRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKSITQYVEVV
PQMEKERRLEQILRSQERGSKAIIFCSTKRLCDHLGRSVGRNFGAVVIHGDKSQGERDWV
LNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFT
FFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMRGGGGGGGPGFSQDRRGMVNRFDSGGG
GSRWDSSGGFGGRDGGFGGRDGGFGGRDGGFGGRDGGFGGRSGGFGMRDDSFGRGGNRGR
GFPGPDASHMNVGRGGFGRFGNNNMDGRGFGRGRGGGGRGFGRGGGGRFDNRRGRSRSRS
PDLVRPRRPSYSRSRSYSRSRSRSRSWSRSRSRSPRRSRDRGGYNRSRSYSRSPSPVYER
RDRARRVSGFDIKPPADIVAATGLETVVPTPLSERRENGVVETQIESAFVRPVVDEP
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacagaagcagctccagcttctgctggtccaagatatgcccctgaggatcca
actcttccccaaccatggaaggggcttattgatggaagcaccggcattctgtattactgg
aatcctgaaacgaacatcactcaatatgaaagaccttctgcaccggctccaccgttacct
gctggcgctcctccccactcttccacaacaccgaagctcgctcagattcctataccttct
gcaagacaaggccaccaagctcagctcgaacaagcaaaaccagttggtcatgcgtctcag
ccgcatggtttacaacagcagccaccgcaatttccatctcaacatgtaaggccccaaata
atgcagcaacagcctccgggccagcagatgcctcaacagtttccccagcaacaaagccaa
tcgatggtgcagcagccacatgggcatccttctctacagacttatcagccaacgccaccg
cagcagcagcaagcaatgcctcagcagctaaaccatcagtatgcacattcacaacaacaa
tacatgggttatcggccttacatgcaaccacaagggcttcaaaactcacatcacacacct
caggttggtccccagactcaacaatttccgagccagccagagtacaactcgttggcgctt
aagagggagggggacgagttccaagggggtaagaaaactgggttttctcaaccccattta
cacaatgttgaaggctcgccatctcataataccccctttgaagctaaggcagcatcacaa
aggacaaatgcaaacttggctctagctcagcaatacaatggacctcaagcaaacatgcaa
cctccttctacagtcacacagtttcaacagccaggggctaatctggttcaccagcagctt
ggacctaggcctccaaatcacatggacccgatgttgcaccagaagtctcatgcttcccct
ttccgatcaaataatacttatgacaataatctgcaatctagacctgggaatgacccgtac
gttaacgcaagaatggaagggccggttaggggcacacaaccacttcatcctgcagcaatg
cctaaggatataaggataggtggcggtccacctgcaaatgctgatcccgccacgggacaa
acaggtcatggaacatatagacacgctggtccagcttttccaaccgaagggaggcctcat
tttgtcacaccttctgatgttccccatctctcgcctgttgaaatctacctaaaacaacat
gaagtctcaacaactggtgagaatattccagcaccattcatcacgttcgaatctagtggt
ctcccacctgaaatacttcgagagttgctttctgctggatttccatcaccaacaccgatc
caggctcaaacatggccaattgctctgcagagcagggatatagttgccgttgcaaaaact
ggttctggtaaaacattgggatacttgatccctgccttcattcttctaaggcactgtcgt
aatgacccccgcaatggcccaacagttttgattttagctcccactcgagagctagccaca
caaatacaagacgaagcccttaggttcggtcggtcttccaggatctcgtgcacttgtttg
tatggtggagctccaaagggtcctcaattaaaagagttggaacgaggagctgatattgtg
gtggcaactcctgggcgtctaaatgatatattggagatgaagcagattgatttccagcag
gtttcccttcttgtgcttgatgaggcagatcggatgcttgacatgggttttgaaccccaa
atccgtaagattgtgaacgaaattcctcctcggagacagactcttatgtacacagcaact
tggccaaaagaagtacggaaaattgctagtgatcttcttgtgaaccctgtccaagttaat
ataggcagagtagatgagttggctgcaaacaagtcgataacacagtatgttgaagttgtc
ccacaaatggagaaagagagacgcttggagcaaatcctgaggtcgcaagaacgaggttca
aaagctataatattctgttccacgaagagactctgtgatcatctaggacgcagtgttgga
cgtaattttggcgctgttgtaatccatggagacaaatctcaaggtgagagagattgggta
cttaaccagttccgaagcgggaagtcgtgtgttttgatagctaccgacgttgctgcccgg
ggactggatataaaagacataagagttgtgatcaactatgattttccaaccggtgttgaa
gactatgtccaccgtattgggagaactggtcgagctggtgcaactggagttgcattcact
ttctttacagagcaagattggaaatacgcgcctgatctgatcaaagttctggaaggagca
aaccagcaagtaccgcctcaggtgagagacattgcaatgcgtggtggtggtggtggtggt
ggtccaggttttagccaggaccgaagaggtatggtaaaccgttttgactctggcggtggt
ggtagccgttgggattcttcaggtgggtttggtgggcgtgacggcgggtttggtgggcgt
gacggcgggtttggtgggcgtgatggcggatttggtgggcgtgatggtgggtttggtggc
cgtagtggcggatttggaatgagagatgactcattcggacgtggcgggaatcggggtcgg
ggttttcctggtcctgatgctagtcatatgaatgtgggtagaggcggatttggtcggttt
ggcaataataatatggatggccgaggctttggtcgtggtcgtggtggtggtggtagaggc
tttggtcgtggtggtggtggacggtttgataacaggagaggtagaagccgtagcagaagt
cctgacttggttcggccaagacgcccgagctatagccggagtcggagctatagtcgtagc
cgtagccgtagcaggagctggtcacgctcaaggagccgtagccctaggcgtagccgtgac
cgtggtggttataaccggagcagaagctatagccgtagtcctagtccggtttatgaaaga
cgggatagggcacggcgtgtgtctggatttgatattaaaccaccagctgacattgtagca
gcgacgggtcttgaaaccgtggttcctacgccattgtctgagagaagagagaatggggtt
gtcgagacacagatagaatcggcttttgtacgaccggtggttgatgaaccctaa
DBGET
integrated database retrieval system
