Eutrema salsugineum (saltwater cress): EUTSA_v10019957mg
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Entry
EUTSA_v10019957mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14301
nuclear pore complex protein Nup107
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10019957mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10019957mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10019957mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10019957mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10019957mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
18023444
NCBI-ProteinID:
XP_006407123
UniProt:
V4NPV9
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MDMDMDTSPSYFDPEVLSVRDQFRRYRKRHSTSPHEELSSPNVSENRLLYDGHYIHSPTN
TALLLENIKEEVDNFHTDHYEGTLANPLSASRRESAGILDADNEAVFRRVESQSLKACKI
EHDELAESGDTTFALFASLFDSALQGLMPIPDLILRLEESCRDVSQSIRYGSDIRHRVVE
DKLMRQKAQLLLGEAASWSLLWNLYGKGTEEIPKELIMSPSTSHLEACQFVVNDHTAQLC
LRIVLWLEELASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLRKTGSAADTVHHLDFDA
PTREHAQLLPDDNKQDESLLEDVWTLIRAGRIEEACDLCRSAGQPWRAATLCPFSGMDMF
PSVEALVKNGKNRTLQAIELESGFGNQLRLWKWASYCASEKIAEQDGGKHEVAVFANQCS
NLNRILPICTDWESACWAMAKSWLDVQVDLELAQSKPGLTEKFKSCLDESPETMQNGCQA
SFGPEDWPLHVLNQQPRDLPALLQKLHSGEMVHEAVVRGCKEQHRQIQMNLMLGNISHLL
DIIWSWIAPLEDDQSNFRPHGDPHMIKFGAHMVLVLRYMLGDEIKDSEKLSNVGDLILHM
YAMFLFSKQHEELVGIYASQLARHRCIELFVHMMELRMHSSVHVKYKIFLSAMEYLPFSP
VDDSQGNFEEIVDRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAVAIQWLCFTPPSTIK
DVKDVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPDTL
EDYVSENLQEFQDWNEYYSCDAKYRNWLKLQLENAEVTELSEEENQKAVVAAKETLDSSL
SLLLRKDNPWLTYLEDHVFEVEEYMFLELHATAMLCLPSGECLCPDATVCAALMSALYAS
VSEEVVLDRQLMVNVSISSRDSYCIEVVLRCLAIEGDGLGPHNANDGGLLSAVAAAGFKG
ELTRFKAGVTMDISRLDSWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVCLME
SGNPPEDHDELIELVASDETGFLSLFSQQQLQEFMLFEREYRMSQLELQEELSSSS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatatggacacttcccctagctacttcgaccccgaggtcctcagtgttagg
gatcaattccgtcgttatcggaagagacactctacatcgccacatgaggaactctcgagt
ccaaatgtcagcgagaacagattactgtatgatgggcattacatccatagtccaacaaat
acagccttgcttcttgaaaacattaaagaagaggttgacaactttcacaccgatcactac
gaaggaacacttgcaaacccgctctctgcttccaggagggaaagtgctggaattctggat
gctgataatgaggctgtgtttcgtcgagtagaaagtcaatcactgaaggcttgcaagatt
gagcatgatgagttggcggagagtggagatacaacctttgctctgtttgcttccctgttt
gattctgctcttcaaggactgatgcccattcctgatctaatattgagacttgaggagtcg
tgcagggatgtttcacaatcaattaggtatggatcagatataaggcatcgggttgtggag
gataaacttatgagacagaaggctcagcttctgctcggtgaggctgcctcctggtcactt
ttatggaacctatatggaaaaggtactgaagaaattccaaaggaattgattatgtcccca
tcaacatctcatttggaggcttgtcagtttgttgtaaacgaccatacagctcagctttgc
cttcggatagtcctgtggctggaagaactagcttcaaaatcacttgatttggaaaggaag
gtgcggggatctcatgtgggtacttaccttcctaacgctggagtgtggcatcacacacaa
aggtacctcaggaaaactggctctgccgctgacactgtacaccatctggattttgatgct
ccaactcgtgaacatgctcagcttcttcctgatgacaataaacaagacgaatctcttctt
gaggatgtctggactttgataagggctgggagaatagaggaggcatgtgacctttgcagg
tccgctgggcagccatggagagctgcaactttatgccctttttctggaatggacatgttt
ccttctgttgaggcactggtaaagaatgggaaaaataggactcttcaggctatcgagctg
gaaagtggctttggcaatcagctgcgtctttggaaatgggcttcgtactgtgcatcagag
aaaatcgcagagcaggatggcggcaaacatgaagttgctgtttttgcaaaccaatgtagc
aacctcaaccgcatcttaccaatttgtactgattgggagtcagcttgctgggcgatggca
aaatcatggcttgatgttcaagttgatctagagctcgcccaatcaaagccgggcttgaca
gaaaagtttaaaagctgtcttgatgaaagccctgaaactatgcaaaatggttgtcaggct
tcatttgggccagaagattggcccctccatgttctaaaccaacaaccccgtgaccttcct
gctctgcttcagaaactccattcaggggaaatggtgcacgaagctgttgtcaggggatgc
aaagaacaacaccggcaaattcagatgaaccttatgttgggaaatatctcacatcttctt
gatataatttggtcatggatcgcgcccttggaagatgatcaaagcaactttaggccccat
ggcgaccctcatatgataaagttcggggctcacatggtgcttgttcttaggtatatgctt
ggtgatgaaatcaaggacagtgagaagctcagtaatgttggtgatcttattcttcatatg
tatgcaatgtttctattttcaaaacaacatgaagaactagtaggaatttatgcttctcag
cttgctcgtcaccgctgcatagaactttttgtacacatgatggagctacggatgcatagc
agcgtacatgtgaagtacaaaatcttcctttccgctatggaatacttgccattctctcct
gtagatgactcacaaggaaattttgaggaaatagttgacagggttttatcaagatcccgg
gaaatcaaacttgcaaaatatgatccctcagttgatgttgcggaacagcatcgtcaacag
agtcttcaaaaagccgtagccatccagtggctctgttttacacccccatctactataaag
gatgtcaaagatgttacttccaaattactcctgcgatctttgatgcacagcaacatactt
ttccgagagtttgctttgattgccatgtggagggtgcctgcaactcctgtgggtgcacac
acacttcttagttttcttgctgaacctttgaagcaactctcagaaaatccagatacactt
gaggattatgtttccgagaatttgcaagagttccaagactggaatgagtattattcctgt
gatgcaaaatatcgcaactggctcaaactccaattagagaatgctgaagtcactgaactg
tcagaagaggaaaatcagaaagctgttgtagcagccaaagaaactttggattcttctttg
tcactgctcctcagaaaagacaatccctggttgacatatcttgaagaccacgtattcgaa
gtagaagaatatatgttccttgagttgcatgcaactgcgatgctctgtttgccttctggt
gaatgtttgtgcccagatgccactgtttgtgcggcattgatgagtgcgctttatgcttct
gtcagtgaggaagttgttttagaccgccagttaatggtaaatgtatcgatttcatcaagg
gacagctactgcatcgaggtcgtgctccgatgtttagcaattgagggtgatggacttggg
ccacataatgcaaatgacgggggtcttttaagtgcagttgcggcagctggatttaaaggt
gagcttacccggttcaaagcaggtgttacaatggatatatcccgcctagactcttggtat
tcaagcaaagagggctcgcttgaaacacctgcaacttatatcgtccgcggtctctgtagg
agatgctgtcttccagagctcgttcttcgatctatgcaggtttctgtttgtctaatggag
tcgggaaatccacctgaagatcacgatgaactgattgagctcgtggcttctgatgaaact
ggttttctctctttattcagtcagcaacaattacaggagtttatgttgtttgagagagag
tatcgtatgtcccagttggagctccaggaggaactttcgtcatcatcgtga
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integrated database retrieval system
