Eutrema salsugineum (saltwater cress): EUTSA_v10019967mg
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Entry
EUTSA_v10019967mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10019967mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10019967mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10019967mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
EUTSA_v10019967mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
EUTSA_v10019967mg
RSF complex
EUTSA_v10019967mg
WICH complex
EUTSA_v10019967mg
B-WICH complex
EUTSA_v10019967mg
NORC complex
EUTSA_v10019967mg
BRF complex
EUTSA_v10019967mg
NuRF complex (fruit fly)
EUTSA_v10019967mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
DUF1509
Motif
Other DBs
NCBI-GeneID:
18023511
NCBI-ProteinID:
XP_006407951
UniProt:
V4LZW5
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MARISNSDDAYSSEEDEEPVKNNGEEEDEEELEAVARSSDSDDEAVPEEPPVSDEEAAPM
EDDYEDEEDDEKAEISKREKARLKEMQKLKKQKIQEMLDSQNASIDADMNNKGKGRLKYL
LQQTELFAHFAKGDPSSSQKKTKGRGRHASKVTEEEEDEEYLKEEEDGLTGSGNTRLLTQ
PSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPH
MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMAIK
EKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN
FLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETIL
KVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTT
GDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTG
GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH
RIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRY
GAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDDD
NKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQLHD
FQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEELEGGDPLTAEEVEEKEGLLEEGF
STWSRRDFNSFLRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIK
NIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIHKL
GYGNWDELKAAFRTSPLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQARKE
KKLAKSATPSKRALGRQPSESPSSLKKRKHLR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaatttcgaattctgatgacgcttactcgtcggaggaggatgaagagccggtt
aagaacaatggagaagaagaagacgaggaggagctcgaagctgtcgctcgctcttctgac
tccgatgatgaggccgtacccgaagaacccccagtctccgacgaagaggccgcccctatg
gaagatgattacgaggacgaagaagatgatgaaaaagctgagatcagcaaacgtgagaaa
gccaggcttaaagagatgcagaagttgaagaagcaaaaaattcaagagatgctggactca
caaaatgcttccatagatgcggatatgaacaacaaaggaaaagggagactgaagtatctt
ctgcagcaaactgagttatttgcacactttgctaaaggtgatccatcttcttctcagaag
aagacgaaaggaaggggtcgtcatgcatccaaagtaactgaagaggaggaagatgaagag
tatttaaaggaagaagaggatggcttaactggatctggaaacacgaggttgctcacacag
ccctcttgtattcaagggaaattaagagattaccaattagctggtttaaactggctcatt
cggctgtatgaaaatggcataaatggaattcttgctgatgaaatgggtctgggaaagacg
cttcaaacgatttctttgttggcctaccttcatgaatacagaggaatcaatggtcctcat
atggtagttgctccaaaatcaacccttggtaattggatgaacgaaattcgccggttttgt
cctgtcttgcgtgctgtgaaattccttggtaatcctgaggaaaggagacatattcgtgat
gacctcctagttgctgggaaatttgatatttgtgtcacaagctttgagatggccataaaa
gaaaagacagcactgcgtcgctttagctggcgttatattatcatcgatgaagcgcatcga
atcaagaacgaaaattcactcctttctaaaaccatgagactttttagcaccaattatcgg
cttcttatcacgggaaccccccttcagaataatcttcatgaactgtgggctcttctcaat
tttcttctgcctgagatttttagttcagcagagacttttgatgaatggtttcagatttct
ggtgaaaatgaccagcaggaagttgttcaacaacttcacaaggtccttcgaccatttctt
cttcggagacttaaatcagatgttgagaaaggtttgcctccaaagaaggagacgatactt
aaagttggcatgtctcagatgcaaaaacagtactataaggcgttactgcagaaggatctt
gaagcggttaatgctggcggagaacgcaaacgtctgctaaacattgcaatgcaacttcgt
aaatgctgtaatcacccttatctcttccagggtgcagagcctggtcccccatataccacc
ggagatcaccttataacaaacgctggtaagatggttctcttggataaattgcttcctaag
ttgaaggaacgtgattcgagagttctgatattctctcagatgacaaggcttttggatatt
cttgaggattatttaatgtatcgcggttatctgtactgccgtattgatggaaatactggt
ggtgatgaacgagatgcctccatcgaagcctacaacaaaccaggaagtgagaaatttgtt
ttcttgttatctactagagcaggagggcttggtatcaatcttgctactgcagatgtcgtg
attctttatgatagtgactggaacccacaagtcgacttgcaagctcaggatcgtgcccat
aggattggtcaaaaaaaagaagttcaagtgtttcgattctgcactgagtctgctattgag
gagaaagtgattgagagagcttacaagaagttggcgcttgatgctctggtaattcaacaa
gggcgattggcagagcagaaaactgtcaataaggatgaattgcttcaaatggtaagatat
ggggctgagatggtgttcagttctaaagatagcacaatcacagacgaggatattgataga
atcattgcgaaaggagaggaggcaacagctgaacttgatgccaagatgaagaaattcaca
gaagatgcgatacagtttaaaatggatgacagtgctgacttctatgattttgatgatgac
aataaggatgagaacaagcttgattttaaaaagattgtgagcgacaactggaatgatcca
ccaaagcgggagaggaagcgcaattactctgaatctgaatactttaagcaaacattgcgg
caaggtgctccagctaaacctaaagagcctagaattccgcgcatgccccagttgcacgat
ttccagttttttaacattcagagattgaccgagttgtatgaaaaggaagtacgctatctc
atgcaaacacatcagaagaatcagttgaaagacacaattgatgtagaagaactagaaggt
ggagatcccttaactgctgaagaagtagaagaaaaggagggtttattggaggagggtttc
tcaacatggagcagaagagacttcaatagtttccttagggcttgtgagaagtatggccgc
aatgacatcaaaagcattgcatcggagatggaaggcaaaacagaggaagaagtagaaaga
tacgccaaagtattcaaagagcgatacaaggagctgaacgactatgatagaatcattaag
aacatagagaggggagaggcaagaatctctaggaaagatgaaatcatgaaagccataggg
aagaaactcgatcgctacagaaacccttggctggaactgaagattcaatatggtcagaac
aaaggaaagctttacaatgaagagtgcgaccgtttcatgatctgcatgatccacaaactt
gggtatgggaactgggatgagctaaaggcagcgttcaggacatcgcctttgttcagattt
gactggtttgtgaaatcccgcacgagtcaggaactcgcaagaagatgcgacactctgatt
cgactgattgagaaagaaaaccaagaatttgatgagagagagaggcaagcccgtaaagag
aagaagctcgcaaagagtgcaacaccatcaaagcgagccttaggaaggcaaccaagtgag
agtccttcatcgttgaagaagcgcaagcatctgagatga
DBGET
integrated database retrieval system
