Eutrema salsugineum (saltwater cress): EUTSA_v10019995mg
Help
Entry
EUTSA_v10019995mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10019995mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10019995mg
Spliceosome [BR:
eus03041
]
Complex A
U1 snRNP components
U1 related factors
EUTSA_v10019995mg
Complex B
EUTSA_v10019995mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
FF_PRPF40A
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
18024239
NCBI-ProteinID:
XP_006406474
UniProt:
V4LZH1
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MANNPQYPGIQPFQHPNASSLDLPRGFAPSMNFQFRPTIQAPQSEQVARLSTQNFQCVGR
GGPGGTTMNNGFPPQPYAPQLLQSMHHSLERPSQSNQVQHAPLGPPTRISQPNVPIASGT
SLPQPYAQTPDISMSGFGGPRALFSYPSGTSYETLRAPTQVIGPNSHGQAQPRASISQTA
ALSSIMIPTFEQPKAALFQPIPSQVTVIDWVEHTSADGRRYFFNKRTKQSTWAKPVELMT
LFERADARTDWKEHSSPDGRKYYYNKVTKQSTWTMPEEMKIAREQAEKASVQGLHAEGII
GASQVPSRSDTASPAAPTGLPSQTSSTLSTSDISEKLAPTSDWKQAASVSESSPPVENVD
RVQTIADKTSQVCDTAKTADHSATLTITSAATLVEEDTVSVENSGGSDDMSAKNTNQGSG
TGPEESQKHVVESERVDSQLEEKQIHQENFSYNNKSEAVDVFKYLLKSVNVGSDWTWEQA
MREIINDRRYGVLRTLGERKQAFNEFLVQMKRAAEEEKVARQKKRYEDFRRMLEECLELT
PSTRWSKAVTMLEDDERFKDVEREKDRRNIFEDHITDLKEKERVKALEDRKRNITEYRRF
LESCNFIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEEQ
KKAERKHRDEFRGLIDEHIAKGELTAKTSWRDYLTKVRDLPVYSAIASNSSGATPKDLFE
DAVEDLKRKYHDLKSQIKDVLKLRKVTIHAGSTFDEFKVSIPEGIGFPPIPDCKLKLVFD
DLLERAKEKEEKEARKQTRHTEKLVDMLRSFKEITASSSWEESKHLVEGSEKFRTIGDES
FRKQTFEDYVSHLKEQAKRIKQNKKVHENVKEEHDKGKDKHRREKDRVRERDSEDHHKRG
AADSYNHDMNEPHGKERRRSGRDNHYRHRERHTSLKEDATDHYKESHKPVPGGGHKKSRQ
QVHFVESRERRVIFLFRF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatcctcagtatcctggcattcagccattccagcacccgaatgctagctcc
ttagatttaccccgaggctttgctccatccatgaattttcagtttcgtcctacaattcaa
gctccgcagtctgagcaagttgctcgcttgtcaactcagaattttcagtgtgttggcaga
ggtggaccaggtggtacaacgatgaacaatggatttccacctcaaccttatgcacctcag
ttattgcaatcaatgcaccattcgcttgaaaggcctagccaatcaaatcaggtgcaacat
gcgccactaggacccccgactcgaatttcacaaccaaatgtgccaattgcttctggtacc
tccttgcctcagccttacgcacaaactccagatattagtatgagtggctttggtggccct
agggcactcttttcttatccgagtggcacatcctatgaaaccttgagggcaccaactcaa
gtcattggaccaaacagtcatggtcaggcacaaccaagagcatctatcagccagactgct
gcgctatcttctatcatgattcccacatttgaacaaccgaaggcagctttatttcaacct
ataccttctcaagtgactgtgatagattgggttgagcatacctcggcggatggaaggaga
tattttttcaataagaggacaaagcagtccacttgggcgaagcctgttgagttgatgact
ctttttgagagagcagatgcaagaactgactggaaagaacattcaagtcctgatggaaga
aagtattactacaataaggttactaagcaatcaacatggacaatgcccgaggagatgaag
attgctcgtgaacaagcagaaaaagcatctgttcaagggcttcatgcagaaggcattatt
ggtgcttctcaggtgccatctcgttctgatacagcatcgcctgcagctccgactggttta
ccaagccaaacttcatctacactttcaacctctgatatcagtgagaaactagctcctact
tctgattggaagcaggcagcttcagtttctgaaagttctcctccggtcgaaaatgttgat
cgagttcagacaattgcagataaaacgtcacaagtgtgtgatactgcaaaaactgctgat
cattctgctactctgacgataacttctgctgctacattggtggaagaggatacagtatca
gttgaaaacagtggaggttcagatgacatgtcagctaaaaacacaaatcaaggtagtggg
actggaccagaagaaagccagaaacatgtggtggaaagtgaaagagttgacagtcaattg
gaagaaaaacaaattcatcaagagaatttttcttataacaacaaatcggaagctgtggat
gtcttcaaataccttttgaaatccgtcaatgttggatctgactggacatgggaacaggcc
atgagagaaataattaatgacagaagatacggggttctgaggactcttggagagcgtaag
caagccttcaatgagttcttagttcaaatgaaaagagcagcagaggaggaaaaggtagcc
agacagaaaaaacggtatgaagatttcagaaggatgttagaggaatgcctggagctgact
ccttctacgcggtggagcaaggctgtgactatgttggaagacgatgaacgtttcaaagat
gttgaacgagaaaaagaccgtcgtaatatttttgaagatcatattactgacctaaaggag
aaggagcgggtgaaagctctcgaggatcgcaagcggaacataactgaatacaggagattt
ttggaatcttgcaatttcatcaagcctaatagtcaatggcgcaaagttcaggaccgctta
gaagtggatgaaagatgttcacgtcttgagaaaattgaccagctagaaatctttcaggag
tatctgcgcgatctggagagagaagaagaggagaaaaagaagatacaaaaggaggaacaa
aaaaaggcagagcgaaagcatcgtgatgagttccgtggcctgatagatgaacatattgca
aaaggagagcttactgccaaaactagttggcgtgattatctaaccaaggtcagagattta
cccgtatattcagcaattgcatcaaactcctctggagctactccaaaagacttatttgaa
gacgctgttgaggatttgaaaagaaagtaccatgacctcaaatctcagataaaggacgta
ttgaagctgagaaaggtaacaatacacgctggatcaacatttgatgagttcaaggtctca
attcccgagggtatcggtttcccacctattcctgactgtaaactgaagttagtttttgat
gatttgctggaaagggcgaaggagaaggaagagaaggaagccagaaaacagacacggcat
actgaaaaattggtggatatgcttcgctccttcaaggagataactgcctcttcatcctgg
gaggaatcaaagcatcttgttgaaggtagtgaaaaattccgtactataggagatgagagc
ttccggaagcagacattcgaggattacgtatcacacctcaaagagcaagcaaaaaggatc
aaacagaacaagaaggtacacgaaaatgtgaaagaggaacatgacaaggggaaggataaa
caccgaagagagaaggacagagtgcgagaaagagacagtgaagatcatcataagagaggt
gcagccgatagttacaaccatgatatgaatgaaccccatgggaaagaacgtagaagatca
ggaagagataaccattatagacatcgagaaagacatactagtttgaaggaagatgcgaca
gaccattacaaagaatcccataaacctgtacctggtggtggccacaagaaatcaagacaa
caggtacacttcgtagaatcccgtgaacgtagagtaatatttttgtttaggttttga
DBGET
integrated database retrieval system