Eutrema salsugineum (saltwater cress): EUTSA_v10019999mg
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Entry
EUTSA_v10019999mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10019999mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EUTSA_v10019999mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EUTSA_v10019999mg
Prokaryotic type
EUTSA_v10019999mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
18024381
NCBI-ProteinID:
XP_006406854
UniProt:
V4M0H6
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MLTSMPHIPQNLGLVGFSPLKSSSFALFLRPFSLYPIFASSPSSSRPSRRPRTAGYRRSD
PSPRFPPRRKWSSFEEEKSRQRKGLSPMEKDKASFDPSSDPFGFNKRRAEGMDKFDKPKK
NLKRNTRTLNPTNTIAYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKI
KLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGEEGLSVNVWGPSDLKYLVDAMRSFIPRA
AMVHTRSFGPSLTTSDSTPQIGSSKPKDEPFVLVDDKVVKISAILLEPSRSEESGSKPGE
TSVVYVCELPEINGKFDPHKAMALGLRAGPKYGQLQSGQSVQSDFKDITVHPSDVMGPSV
PGPVVLLVDCPTESHAEELLSVPAMKSYYSCPDSSSDGAKFVNCIIHLSPASVTNSPTYQ
SWMKRFHSAQHILAGHETKNMEFPILRASSRITARLNYLCPQFFPAPGFWSPQHVNNSII
SDSLSKCFGSSLGETISAENLLKFTLRPHGNLGLDRSCIPSQLTSSRVINELLSEIPEIS
GKTEEVKRLWNGLHNKMMIEEPWLNESTVPSCLENIRRDDMEIVLLGTGSSQPSKYRNVS
AVYIDLFSRGSMLLDCGEGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGLARIL
ARRRELLKGVPHEPAIVIGPRPLKNFLDAYQRLEDLNMEFLDCRNTTTTSWATLETTSPE
KITGTKNAEGSLFSKGSPMQSVYKRPSSPLTDNSSALPYLKKLKKFLGEMGLEDLISFPV
VHCPQAFGVVVKAAERKNIVGDQIPGWKMVYSGDTRPCPQMVEASKGATVLIHEATFEDA
LVEEAVAKNHSTTKEAIDVGSSAGVYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDMMSI
NMADLHVLPKIVPYFKTLFRNVVVEEEEEEEEEDEEESDADGLMRHKVSSFFRN
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcaatgcctcatataccccaaaacctaggccttgtcggattctctcctctc
aagtcttcttctttcgctctctttctcagacccttttctctctacccaatcttcgcttct
tctccttcctcttctcgcccgagtcgccgccctcgtaccgccggttaccgtcgcagtgac
ccttctcctcgcttccctccgagacgaaagtggagtagtttcgaggaggagaagagtagg
cagagaaaaggcttgtctccgatggagaaagacaaagctagttttgatccttcttctgat
ccttttgggtttaataagagaagagctgagggaatggataagttcgataagcctaagaag
aatctcaagcggaacactcgcacgcttaatcccaccaacaccattgcctatgttcagatc
cttgggacgggaatggatacacaagatacatcaccttctgtactactcttctttgacaaa
caaaggttcatctttaatgctggagagggcttgcaacgtttttgtacagagcataaaatc
aagttatcaaaggtggatcatatatttttgtctcgtgtctgctcagagacagcaggcggg
cttccaggtcttctactgactctggccggtattggtgaagaaggattatccgtaaacgtt
tggggtccttcggatcttaagtatttggttgatgctatgaggtcatttatccctcgtgcc
gcgatggttcacacacgaagttttggtccgtcgttgactacatcagactccacgccacag
attggctcaagtaaacccaaagatgagccctttgtccttgtggatgacaaagtagtgaaa
atctccgccattctccttgaaccaagccgctcagaggaatccgggagcaaacctggtgaa
acctcagttgtatacgtatgtgaattacctgaaatcaatggaaagtttgacccacataag
gccatggctcttggactgagagctggtccaaaatatggtcaacttcagtctggacagtca
gtgcagtcagatttcaaagatattacggtccatccgagtgatgtgatgggaccttcagtt
cctggtcctgttgttttgcttgtggactgtccaacagagtcgcatgccgaggaactgtta
tctgttccggctatgaagagttattattcatgtcccgacagttcatcagatggggctaag
tttgttaattgtattattcatttaagtccagcttctgtaacaaatagtcctacttaccaa
agctggatgaagaggttccattctgcccagcacattctcgctggacacgaaacgaagaat
atggagttcccaatcctgagagccagttctagaatcacagccagacttaactatctgtgc
cctcagttctttcctgctcctggattttggtctcctcaacatgttaataactcgataatt
tccgattctttaagcaagtgcttcggttcaagtcttggtgaaaccatatccgcagaaaat
cttctcaagttcactttgcgtccacatggtaaccttgggctagacagatcttgtatccct
agtcaattgacatcctcacgagtgataaatgagctactttcagaaattcctgagataagc
ggtaagaccgaagaagtcaagcgattatggaatgggctacacaacaagatgatgatcgaa
gagccatggctgaatgagagcactgttccaagctgtcttgaaaacattagacgagacgac
atggaaatagttcttttgggcactggttcgtcccaaccctcaaaatacagaaacgtcagt
gcagtttatatcgacctattctctagaggtagtatgctcttggattgtggggaaggtacc
ttaggccagcttaaacgacgatatggtttagaaggagctgatgaagcagtcagaaacttg
agatgtatatggatctctcacatccatgctgatcaccatacgggtcttgcaagaatcctt
gctcgtagacgtgagcttttgaaaggagtgcctcatgagccagcgattgtgattggacca
agaccgcttaagaactttctcgatgcatatcaaagactcgaggatttaaatatggagttt
cttgattgcaggaacaccacaacaacttcttgggctactctagaaaccaccagccctgag
aaaatcaccggtactaaaaacgcagaaggttctttgtttagtaaaggaagtccaatgcag
agtgtatataaaagaccgagtagccccttgaccgacaattcttcagctttaccatactta
aagaaactgaaaaagttcctcggcgaaatgggtttggaggatttgattagtttccctgtt
gtacattgccctcaagcctttggggtcgtagtaaaagcagcggagagaaaaaacatcgtc
ggagatcagattccggggtggaaaatggtttactcaggcgacacaaggccttgtcctcag
atggttgaagcttcaaaaggagcaaccgttcttatacatgaggcgacgtttgaggatgcg
ttggtagaagaggctgtggctaagaatcatagcacgactaaagaagcaatcgacgtggga
tcttcggcgggagtgtaccggattgttctgacacattttagccagagatacccgaagatt
ccggtgattgacgagtcgcatatgcacaatacctgcattgctttcgatatgatgagtata
aacatggcggatttacatgtgcttcctaagattgttccttacttcaaaactctgtttaga
aacgtggtggttgaagaagaagaggaagaagaagaagaagacgaagaagagagtgatgct
gatggtttgatgagacacaaagtctcaagctttttcaggaattag
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