Eutrema salsugineum (saltwater cress): EUTSA_v10020006mg
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Entry
EUTSA_v10020006mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EUTSA_v10020006mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10020006mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EUTSA_v10020006mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2465
Motif
Other DBs
NCBI-GeneID:
18023691
NCBI-ProteinID:
XP_006406595
UniProt:
V4M6V1
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MEGNFEEQNKLPELKLDAKQAQGFLSFFKTLPTDSRAVRFFDRKGYYTAHGENSIFIAKT
YYHTTTALRQLGSGSNALSSVSISKNMFETIARDLLLERNDHTLELYEGSGSNWRLVKTG
SPGNIGSFEDVLFANNEMQDTPVVVSLFPNFQESRCVIGMAYVDLTRRILGLAEFLDDSR
FTNLESSLVAIGAKECIFPADSGKSSECKSLYESLERCSVMITERKRQEFKGRDLDSDLK
RLVKGNVEPVRDLISGFELATPALGALLSFSELLSDEGNYGNFSIRRYDIGGFMRLDAAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIQMRLDIVQCF
VEEAGLRQDLRQHLKRISDVERLVRSLERRRGGLQQIIKLYQSTIRLPFIKTSLQQYTGE
FSSLISKRYMKKLEALTDADHLGKFIELVEYSVDLDQLENGEYMISSSYDTTLSSLKDQK
ESLEQQIHELHKKTAMELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFVVLE
TRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVASFSEVFEELAGLLSEMD
VLLSFADLAASCPTPYCRPEITSSDMGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW
FQIITGPNMGGKSTFIRQVGVTVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATH
FHELTALAQANSEVAGNTAGVANFHVSAHIDAESRKLTMLYKVEPGACDQSFGIHVAEFA
NFPESVVALAREKAAELEDFSPSSMIINNEESGKRKSREDDPEEVSRGAARAHKFLKEFA
EMPLDKMELKDSLQRVREMKEELEKDAVDCHWLKRFL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaatttcgaggagcagaacaagcttccggagcttaaattagatgctaagcag
gctcaagggtttctctcgttcttcaaaactctaccaactgactcgagagctgttaggttc
tttgatcgcaagggctattatacagctcatggagaaaactcaatcttcattgcaaagact
tactatcatacaactactgctctacgtcagctcgggagtggatcaaatgctctttcaagc
gttagcatcagtaagaacatgtttgaaacgattgctcgggatcttctcctggagcgaaat
gatcataccttagagctttacgagggaagtggatcgaattggagacttgtgaaaacaggt
tctcctggaaacattgggagctttgaagatgttttgtttgcaaacaacgaaatgcaggac
acgcccgttgttgtctccttgtttccaaattttcaggagagcagatgcgttatcgggatg
gcttatgttgatctaaccaggcggattcttggactagctgagtttcttgatgatagccgc
ttcaccaacctggagtcttctctggttgccattggcgcaaaagaatgcatttttccagct
gattccggcaaatccagtgaatgcaaaagcctgtatgagtctctggagaggtgttctgtg
atgataacagagaggaagagacaagagttcaaaggacgagatttagattcagatctaaag
agattggtgaaggggaatgttgaacctgttagagatttgatatccgggtttgagcttgcg
actcctgctctaggtgcattactctcgttctctgaacttctttcggatgagggtaactat
ggaaacttctcaatccgcagatatgatatcggcggattcatgagactcgacgctgcagct
atgagggcgttgaatgtgatggagagcaaaactgatgctaataagaatttcagtttgttt
ggtctcatgaacagaacatgcaccgcagggatgggtaagagactgcttcacatgtggcta
aagcaacctctcgtggatttgaatgagattcagatgagattagatatagttcagtgcttt
gttgaagaagctgggttaaggcaagatcttagacagcatctgaagcgaatctcagatgtt
gaaagacttgtgcggagtctcgaaagaagaagaggcgggttacagcaaattatcaaactc
tatcaatcaacgataaggcttcccttcatcaaaacatctctgcaacagtacaccggagaa
ttctcatcactcatcagcaagagatacatgaaaaagcttgaggctttaacagacgcagat
cacctcggcaagttcattgagctggtagagtactctgtagatcttgaccagctagaaaat
ggagaatacatgatatcttcaagctacgacaccacattatcatctctgaaagaccagaaa
gaatcgctggagcagcagattcacgaattgcacaaaaagacggctatggaacttgatctt
caggtggacaaggctttaaaacttgacaaagcagcgcaatttgggcatgtgttcaggatc
acgaagaaggaagagccaaagatccggaagaagctgacgacacagtttgtagtgctggag
actcgcaaggacggagttaagttcacaaacacaaagcttaagaaacttggggaccagtac
caaagtgttgtggacgattacaagagctgtcaaaaggagctcgttgatcgtgtagttcag
actgttgccagcttctccgaggtgtttgaggagttagcagggttgctctctgaaatggat
gttttgttaagctttgctgatttggcagctagttgccctactccatactgtaggccagaa
atcacatcttcggatatgggagacattgtattagaaggaagcagacatccatgcgtagaa
gctcaagattgggtgaattttataccaaatgactgtagacttatgagaggcaagagttgg
tttcaaataataacagggcctaacatgggagggaagtccactttcattcgccaggtcggt
gtgaccgtactgatggctcaagttggttcatttgttccttgtgataaagcttcaatttct
atcagagactgtatcttcgcccgtgtaggagcaggcgattgccaactacgcggagtgtct
acttttatgcaagaaatgcttgaaaccgcttcgatattaaaaggagctactgataaatca
ctgataataatcgatgaacttggccgtggaacatcaacctatgatggttttggtctcgca
tgggctatatgtgagcatctggttcaagtgaagaaagcccctactctgtttgctactcac
ttccacgaacttactgctttggctcaagcaaattctgaggtcgcaggtaacactgctggt
gttgcaaacttccacgtcagcgcacacattgacgcagaaagccgcaaactcaccatgctg
tacaaggttgaaccaggggcatgtgaccagagctttgggattcatgtggctgagtttgcc
aacttccctgaaagcgtagtggcactcgcaagagagaaggctgcagaactggaagacttc
tctccgtcttccatgattatcaacaacgaggagagtgggaagagaaagagcagagaagat
gatccagaggaagtatcgagaggtgcagcacgagctcacaagtttctgaaagaatttgca
gagatgccacttgataaaatggagcttaaagattcacttcaacgcgtacgtgagatgaaa
gaagagctagagaaagatgccgtggattgccactggctcaagcggttcctgtga
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