KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10020009mg
Entry
EUTSA_v10020009mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K17302  coatomer subunit beta'
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10020009mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eus04147]
    EUTSA_v10020009mg
Membrane trafficking [BR:eus04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    EUTSA_v10020009mg
Exosome [BR:eus04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   EUTSA_v10020009mg
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD40_like WD_LRWD1 TPR_GEMI5 TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 18025096
NCBI-ProteinID: XP_006406892
UniProt: V4LD17
LinkDB
Position
Unknown
AA seq 919 aa
MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTITKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ
ERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVTVKNLYWAESGDLVAI
ASDTSFYILKYNRDLVSSHFDSGRPTDEEGVEDAFEVIHENDERVRTGIWVGDCFIYNNA
SWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKEQHNNVAHFLESRGKIEEALEIATDPDYRFELAIQLGRLEIAKE
IAEEVQSESKWRQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSNLACLA
KEQGKNNVAFLSLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEANAVKARGVYTAAENYPSHADKSSSTLVEAF
RNMQVEAEESLENGDIDHEVAEENGHEEIDKHEEEQHEEEEVVNEEEEEGVVDEDSTDGG
AVLVNGSEGEEEWVLTPRQ
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgccgctcagactcgatatcaagagaaaatttgctcaacgatcagagagagtaaaatct
gtggatctgcatcctacagaaccatggattctggcaagtttgtattctggaaccttgtgt
atttggaactatcagacacagacgataacaaaatccttcgaggtgactgaattgccagtt
aggtcggccaagtttatcccacgcaagcaatgggttgtggcaggcgcggatgatatgtac
atccgtgtatacaactacaatacaatggacaaggttaaagtatttgaggctcattcggat
tacattaggtgtgtagctgtccatccgacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaacggttgggcttgtactcagatatttgaggga
cattcgcactatgtgatgcaagtggtatttaatccaaaagacaccaacacttttgccagt
gcatcgcttgaccgtaccataaagatatggaatcttggttccccagacccaaattttaca
ctggatgctcaccagaaaggagtcaactgcgtagattatttcacaggtggtgataagccc
tatttaattactggctctgatgatcatactgcaaaggtatgggactatcaaaccaaaagt
tgtgtccagacgctagagggacacacacacaatgtctctgccgtatgttttcatccggag
cttccaataatactcacaggttctgaggacggcactgttcgcatttggcacgccacgact
tacaggctagagaacacattgaattatggccttgagagagtgtgggccattggttacata
aaaagttcacgccgggttgtgattggatatgatgaaggaaccatcatggttaaacttgga
agagaaattccagtcgctagcatggacagtagcggaaaaattatatgggccaagcataac
gaaattcaaactgcaaatatcaaaagtattggtgcgggttacgaggttactgatggagaa
agacttcccttggctgttaaagagctggggacctgtgatctttatccacaaagtttgaag
cacaaccctaacgggaggtttgtcgtagtctgcggtgatggggagtacataatctacaca
gctttggcttggagaaatagatcattcggttctggactggaatttgtttggtcgtccgag
ggggaatgtgcagttagagaaagctcgtcaaagataaagatattcagtaaaaatttccag
gaaagaaagagtatacggcctactttctcagctgagaagatttttggaggaacgttgtta
gcaatgtgttcaaatgatttcatctgcttttatgattgggctgaatgtaggctgattcaa
caaattgatgtcacagtaaagaatctttattgggctgaaagtggtgatttagtagctatt
gctagtgatacgtcattctacatcttgaagtacaatcgtgacttggtttcctcacatttt
gatagtggaagaccaactgatgaagaaggtgttgaggatgcttttgaggttatccatgag
aacgatgaacgtgttaggacaggtatatgggttggggactgcttcatttacaacaacgct
tcttggaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgt
ccaatgtatttgttaggctatattgccaatcaaagccgggtctacttggtagacaaagaa
tttaatgtcataggatataccctactgcttagccttatcgaatacaagactcttgtgatg
cgaggtgatttggataaagccaatgaaattttgcctacaattcctaaagagcagcataac
aatgttgctcatttcttggagtctcggggaaagattgaagaagctttagaaattgcgaca
gatcctgactacagatttgagttagccatacaattgggtagacttgaaattgcaaaggaa
atcgctgaggaagtgcagagcgagtctaaatggaggcagttaggagagttagccatgtcc
tctgggaagctgcaattggcggaggattgcatgaagtacgctatggatttgagtggtttg
ttactactttattcttctctgggagatgctgaaggggtgtcaaaccttgcatgccttgct
aaggagcagggaaagaacaatgtcgcctttcttagcttattcatgctgggtagattggaa
gattgtctgcagttactggtggagagcaaccggataccagaagctgctctgatggcacgt
tcttatcttccaagcaaagtttcggagatagtagctctttggagggaagatctcagcaag
gtaaattcaaaagctgcagaatctttggctgatcctgaggagtacccgaatctttttgag
gattggcaagttgctctttctgttgaagcgaatgctgtaaaggcgaggggagtttatact
gctgcagaaaattatccaagccacgccgataaatcttccagtaccctcgtggaagccttc
aggaacatgcaagttgaagcagaagaatcacttgaaaatggagacatcgatcacgaggta
gcagaagaaaatggtcatgaagagattgataagcatgaagaggaacaacatgaagaagaa
gaagtagtgaatgaagaagaagaagagggagttgttgatgaagactctacggatggtggt
gctgtacttgttaatggaagtgagggtgaggaagagtgggtgcttacgccacgtcaatag

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