Eutrema salsugineum (saltwater cress): EUTSA_v10020025mg
Help
Entry
EUTSA_v10020025mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020025mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10020025mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10020025mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
18024982
NCBI-ProteinID:
XP_006406801
UniProt:
V4LWP2
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MASMAAGSGESSSMSTKKNNKRNHKRKREEEVELMDSLPWSTSIPIGEDEDGETFSTLFA
GSAELDGGFLSLEEIDEADYNLAAFPTVESGKTEKGLKSKKQARENNDGNKEAVDEVVEG
EQETEDEEEEGKSKDDLKSRKIEENKTKRKKKKKEKKKKAKEAEKDQDEEAVDEIVKGKQ
EKEDEEEEGEERKGKDGLKSRKIEEKKTKEKKKKAKEAKKDQASSAAVSCDEDNKPEELD
GEQEIPPEFSAWSLMRLHPLLMKSIYHLGFKEPTEIQKACFSVAAFQGKDVIGAAETGSG
KTLAFGLPILQRLLDEREKLGKLYALKGEEAKKYSADGYLRALIITPTRELALQVTDHLK
NAAKNLGVRVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWELMSAGEKHLVELHSLSFF
VLDEADRMVESGHFRELQSIIDLLPVADKPNEGKMQTAQSGDIVSDAPKKKRQTFVFSAT
IALSSDFRKKLKRGSSKKQSSSGEVNSIEVLSERAGIRENVAIIDLTTASILAPKIEESF
IKCEEEEKDAYLYYILSVHGQGRTIVFCTSVAALRHICALLKILGIDVCKLYSDMKQRAR
LKAIDRFRASENGILVATDVAARGIDIKNVRTVIHYQLPHSAEVYVHRSGRTARAFEDGC
SIALIAPNDTSKFYSLCKSFSKESVKIFPLDNSYMPAVRKRLSLARQIDQIERKGSRERV
DRTWLEKHAELMELELDEEESEEERVDNVRQRKATSAQVKKLQEELSSLLSRPMQPKKFS
DRYFAGRGMSPLLQNQLAELTNQKQQQMQTGGDKKRRKLVVVAQNCIEPLQALRDGGKEV
MNMKGQSADKRRDIANLRKKRKEEKIGRRDQRRDQKKKRKLMASS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggctagcatggctgccggaagcggagaatcatcatcgatgtcgacgaagaagaacaac
aagagaaatcataagagaaagcgagaggaagaggtcgagctcatggattcacttccctgg
agcacttctatacctatcggagaagacgaagatggcgaaaccttctccactctctttgct
ggttcagctgagctggacggaggttttctttcacttgaagaaattgatgaagctgattac
aatctggcggcttttcctacggttgaaagtggaaaaacagagaaagggttgaagtcgaag
aaacaagctcgagaaaacaatgatggtaacaaagaggctgtagatgaggtagttgaaggc
gaacaagaaacagaagacgaagaagaagaaggcaaaagcaaggatgatttgaagagtcgt
aagatagaagagaataaaacaaaaaggaagaagaagaagaaggagaaaaagaaaaaggct
aaggaggccgaaaaggatcaggatgaagaggctgtagatgagatagttaaaggcaaacaa
gaaaaagaagacgaagaagaagaaggagaagaaaggaaaggcaaggatggtttgaagagt
cgtaagatagaagagaagaaaactaaagagaagaagaagaaggccaaggaggccaaaaag
gatcaggcttcttctgctgcagtaagctgtgatgaggataacaaaccagaggagcttgat
ggcgaacaagagattcccccggagtttagtgcatggagtttgatgagacttcatccacta
ctcatgaagtcaatataccaccttggattcaaggagccaacagaaattcagaaggcttgt
ttttccgtagcagcatttcagggaaaggatgttattggtgctgcggagactgggtctgga
aagacgcttgcttttgggttgcccatactgcaacgcctcttagatgagcgagaaaagctt
ggtaaattgtatgcattgaagggagaggaagcgaagaaatattctgcagatggctattta
cgagctcttatcatcactccaactagggaacttgctctacaggtgacagatcatcttaag
aacgctgctaaaaatcttggcgtcagggttgttcctattgttggtgggatgtcatcagca
aagcaggaaagacttctgaaaggaaaaccagaaatagttgttggaactccaggaaggcta
tgggaacttatgtcagccggagaaaaacatcttgtagagctacattccttgtctttcttt
gtgttggatgaggctgatcgcatggttgaaagtgggcatttccgggagctgcagtctatc
atcgatttgcttccagtagcagataaaccaaatgaagggaaaatgcaaactgcgcagagt
ggtgacatagtttccgacgccccaaagaagaaaagacaaacatttgttttctcagctacc
atagcactgtcttctgacttccgtaaaaagctaaagcgtggctcctcgaaaaagcagtca
tcgtctggtgaagtgaattctattgaggttttatctgaacgagctggaataagagaaaat
gttgccatcattgatctgacaactgcatctattttggcaccaaagattgaagaatctttt
atcaagtgcgaagaggaggaaaaagatgcttacttgtattatattctgagcgtccatgga
caaggtcggacaattgttttctgtacgtcagtggcagctttgcggcatatctgtgcgctt
ttaaagattcttggaattgatgtttgcaaactctactcagatatgaagcagcgtgctcgg
ttgaaggcaatcgaccgcttccgtgcaagcgaaaatggaattctcgtcgcaacagatgtt
gcagcaaggggaattgatattaagaatgtccgaactgttattcactaccaacttccacat
tcggcagaagtatatgtacatagaagcgggaggacggctagagcatttgaagatggatgc
agcatagctttgattgcgcctaatgatacatcaaagttctactcgttatgcaagtcattc
tctaaggaaagcgtaaagatattccctttggataactcttatatgccagctgtgaggaag
cgattatctctagcacgtcaaatagaccagattgagcggaaaggctcgcgggagagagta
gacagaacgtggcttgaaaaacacgctgaattgatggagctcgaattagacgaggaagaa
agtgaagaggaaagagtggacaatgttaggcagagaaaagccacctcagcacaagttaaa
aagttgcaggaggaacttagctcgctcttatcacgtcccatgcagccgaagaaattttca
gaccgttactttgcagggcgtggtatgtcgcctcttttgcagaatcagctagcagagtta
accaatcaaaagcaacaacaaatgcaaactggtggagacaaaaagagaagaaagcttgtt
gtggttgcccagaactgcatcgaacctcttcaagcccttcgtgatggtggtaaagaggtg
atgaacatgaaaggtcagagtgcagataagaggcgtgatatagcgaacttgaggaagaaa
agaaaggaagagaagattggtcggcgtgatcagcgaagggatcagaagaaaaagagaaaa
ctaatggcttcttcttaa
DBGET
integrated database retrieval system
