Eutrema salsugineum (saltwater cress): EUTSA_v10020108mg
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Entry
EUTSA_v10020108mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10020108mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10020108mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EUTSA_v10020108mg
mRNA degradation factors
5'-3' decay
Decapping complex
EUTSA_v10020108mg
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18023649
NCBI-ProteinID:
XP_006406189
UniProt:
V4LYP7
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MERSDSRDLYNFVRASSDQNSSLFDASQYEFFGQNLDEMSLGGIDDDEMIAPVLGHADDD
EYHLFDKGEGAGLGSLSDLDDLATTFAKLNRVVTGPKHPGVIGDRGGSGSFSRESSSATD
WTHDTELTSWLDEQDQEANRWSSQPQSSAHSKPLYRTSSYPQQQPQLQHYNSEPIIVPES
AFTSFPPPGSRSPQASPGNLHRAPSLPGGTQLTYNPPSPLSNSSFHLSGMSHRPHYGGNL
ARYASCGPTLGNMVQPHWVTDPGLLHGDHSGLLHSLVQQQHQQLPPRNGLMSQQLIALQQ
RQSYAQLAALQSQMYSSYPSPSRKVSFGVGEVREHKHKSSHRSRKNRGISQQASDAASQK
SESGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQAQLAKKSAGSKAVSQFYPS
QLKDHQPRSRNSSEQHPLVHVDALGKITLPSIRRPRALLEVDSSAVFNDGSADHKGSGKH
LEQEPLVAARVTIEDALGVLIDIVDIDRTLQSTRPQDGGAQVKRKRQILLEGLATALQLA
DPFSKTGQKSGLTSKDDVVFLRIATLPKGRKMLTKYIQLLVPGTEIARVVCMAVFRHLRF
LFGGLPSDTLAAETIADLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSAGDG
ASVVLISLLERAAEVVVVVPRVSHGNNPNDGLWRASFDEFFNLLTKYCRSKYETIRSQNQ
GSAADVLELAIKREMPAELLRASLCHTSDDQRNYLLNFGRKPSAVSESASHARGGQINSE
SVRG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattccagggatttgtacaactttgttcgtgcttcctcagatcaaaat
agttcactctttgatgcatctcaatatgagttttttggtcaaaatctggacgaaatgtcg
ttgggagggattgacgatgatgaaatgatcgctcctgttcttggacatgctgatgatgat
gagtatcacttgtttgataaaggagagggtgcaggtttaggatcactgtctgacttggat
gatcttgcgaccacttttgcaaagttaaacagagttgttaccggacccaagcaccctgga
gttattggtgacagaggaggatcaggatccttttcaagagagagctcttctgctaccgat
tggacacacgacacagagctcacaagctggttggacgaacaagatcaagaggctaataga
tggtcctcacagccacaatcatcagctcattcaaaacctttgtacaggacatcctcctat
cctcagcagcaaccacagctgcagcactacaatagtgaaccaataattgtaccagaatca
gcttttacctcctttcccccacctggtagcagatctccgcaggcttcaccgggaaatctc
caccgcgctccttctcttcctggtggtacccagctcacctataatccaccttcgccgctg
tcaaattctagttttcatctttcaggaatgtcgcacaggccccactatggtggtaatttg
gctagatatgcctcgtgcggtcctacgcttggtaacatggttcaacctcattgggtcact
gatcctggtcttttgcacggtgatcattctggtttattacatagcctggtgcagcaacag
catcaacagttgcctcctcgaaatggtcttatgtcgcaacaattgatcgcccttcagcag
agacagtcgtatgcacaacttgcggcgctacagtcccagatgtatagttcctatccttca
ccatcacgtaaagtctcttttggagttggtgaagttagggaacacaaacataagtcatct
catagaagtcggaaaaacagaggcatctcccaacaggcatcagatgcagctagtcagaaa
agtgaaagtgggttgcagtttagatcaaagtacatgacttcagaagaaatagagagtata
ctcaagatgcagcattctaattcacacagcaatgatccttatgtcaatgattattaccac
caagctcagcttgccaagaagtctgccggatctaaagcagtctctcagttctatccttct
cagttgaaagaccaccagcctcggtctcgtaatagttctgaacagcatccactagttcat
gtagatgcccttggaaagattacacttccttctattcgcaggccacgtgcgttgctcgag
gttgactcttctgctgttttcaacgatggaagcgcggatcataagggctcaggaaaacat
ttggagcaggaacctcttgttgcagcgagggtcacgattgaagatgctcttggagttctt
attgacatagttgacattgacaggactctccaatcaactagacctcaagacggaggtgct
caggtcaagagaaagcggcagatactgctagaaggattagcgacagcacttcaacttgct
gatccgttcagcaaaacgggtcagaaatccgggttgacttctaaggacgacgttgtcttt
ctacgtatagcaactcttcccaagggtaggaaaatgctcacaaagtacatacaacttcta
gttcctggtactgagattgctcgagttgtctgtatggctgtattccgccacttgaggttt
ctattcggtggcctgccttcagatactctagcagcagagacgatagctgatcttgccaaa
gcagtcacggtttgcgttcaagccatggacctccgagcattgagtgcttgccttgcagct
gtagtttgttcttcagagcagccacctctgcgtcctattggaagttctgctggggacggt
gcttcagttgtcttgatatctcttcttgagagagctgctgaagtagtagtggtggttcct
cgagtgagccatggtaataatcctaatgatggtctctggagagcctcgtttgatgaattc
ttcaaccttcttaccaagtactgtaggagcaagtatgagacgatccgaagtcagaaccaa
gggagtgcagcggatgtattggagctggcgataaagagggagatgcctgctgagctttta
cgtgcgagtctctgtcacaccagtgacgaccagaggaactatttattaaactttggtcgt
aaaccgtcggctgttagtgagtcggcgtctcatgcaaggggtggtcagatcaactccgaa
tctgtgaggggttaa
DBGET
integrated database retrieval system
