Eutrema salsugineum (saltwater cress): EUTSA_v10020257mg
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Entry
EUTSA_v10020257mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
eus04141
Protein processing in endoplasmic reticulum
eus04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10020257mg
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v10020257mg
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EUTSA_v10020257mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eus01009
]
EUTSA_v10020257mg
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10020257mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020257mg
03110 Chaperones and folding catalysts [BR:
eus03110
]
EUTSA_v10020257mg
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10020257mg
03051 Proteasome [BR:
eus03051
]
EUTSA_v10020257mg
03029 Mitochondrial biogenesis [BR:
eus03029
]
EUTSA_v10020257mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10020257mg
Protein phosphatases and associated proteins [BR:
eus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
EUTSA_v10020257mg
Spliceosome [BR:
eus03041
]
Complex B
Other components
Prp19 complex
EUTSA_v10020257mg
Complex C
Prp19-CDC5 complex
EUTSA_v10020257mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
EUTSA_v10020257mg
Chaperones and folding catalysts [BR:
eus03110
]
Heat shock proteins
HSP70 / DNAK
EUTSA_v10020257mg
Membrane trafficking [BR:
eus04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
EUTSA_v10020257mg
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
EUTSA_v10020257mg
Proteasome [BR:
eus03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
EUTSA_v10020257mg
Mitochondrial biogenesis [BR:
eus03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
EUTSA_v10020257mg
Exosome [BR:
eus04147
]
Exosomal proteins
Proteins found in most exosomes
EUTSA_v10020257mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
18024831
NCBI-ProteinID:
XP_006407319
UniProt:
V4M1R7
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDPSVQADMRHWPFKVVSGPAEKPMIVVNHKGEEKQFSA
EEISSMVLTKMREIAEAFLGSPIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSNVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQAIEWLDGNQLAEADEFED
KMKELESLCNPIIARMYQGAGADMGGAGGMDEDAPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggcgaaggtccagcaatcggaatcgatctcggtactacctactcatgc
gtcggtgtgtggcaacatgaccgcgtcgagatcatcgccaacgatcaaggcaaccgcacc
actccctcctacgtcgccttcactgataccgagcgtttgatcggagatgctgcgaagaac
caggtggccatgaaccctacgaacaccgtcttcgatgctaagcgtctcattggtagaaga
ttcagtgatccgtctgttcaagcggatatgaggcactggccattcaaggttgtttccggc
ccggcggagaagccaatgattgtcgtcaaccacaagggagaggagaaacagttctctgca
gaagagatctcgtcgatggtcctcactaagatgcgagagattgcagaagcttttcttgga
tctccgattaagaacgctgtggtgacagtgcctgcttatttcaacgattctcagcgtcag
gcgacaaaggacgccggagtcatctctggactcaacgtgatgcgtatcatcaacgagcca
accgctgctgcgattgcgtacggtcttgacaagaaggcgtcgagtgttggcgagaagaat
gttcttatcttcgatttgggaggtggtactttcgatgtgtctctgcttacgattgaggaa
ggtatttttgaagtcaaggccacggctggtgacacgcatcttggaggtgaagattttgac
aacaggatggtcaatcattttgttcaggagttcaagagaaagcacaagaaggatatcact
ggaaatccgagggctttgaggaggctcaggactgcttgtgagagggcgaagagaactctt
tcttcgaccgctcagacgactattgagattgactctctctacgagggtattgatttctac
acaaccatcactcgtgcgaggttcgaagagctcaacatggatctcttcaggaagtgtatg
gagccggtggagaagtgtttgagggatgctaagatggacaaaagcaatgtccatgatgtt
gtccttgtcggtggctcaacaagaatccccaaagtccagcagcttttgcaagacttcttc
aacgggaaggagctttgcaaaagcatcaacccggacgaggctgttgcttacggagcggct
gttcaagctgcgatcttgagcggtgaagggaacgagaaggtccaagatttgttgctcctt
gatgtcactcctctctccttgggtttggaaaccgccggtggtgttatgactgtcttgatt
ccgaggaacaccacgattccgaccaaaaaagagcagatattctcgacctattctgacaac
cagcccggtgtactgattcaagtctacgaaggagaaagagcgagaacaaaggacaataac
ctcttggggaaattcgagctgagtggcattccacctgcaccacgaggtgttcctcaaatc
actgtctgttttgacatcgacgccaacggaatccttaacgtatcggctgaggacaaaaca
acgggtcagaagaacaagatcactatcacaaacgacaagggaaggctgtcgaaggaagag
atcgagaagatggtgcaagaagcagaaaagtacaaagctgaggatgaagaacacaagaag
aaggtcgatgccaagaacgcactcgagaactacgcatacaacatgaggaacacgataaag
gatgagaagatcgcatctaagctcgatgcagctgacaagaagaagattgaggatgcgatt
gaccaagctattgaatggttggatgggaatcagctggcggaggcagatgagttcgaggac
aagatgaaggaactcgagtctctttgcaacccgatcattgcaagaatgtaccaaggtgct
ggtgctgatatgggtggcgccggtggaatggacgaagatgctcccgctggtggtagcggc
ggtgctggccccaagattgaagaagttgattaa
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