Eutrema salsugineum (saltwater cress): EUTSA_v10020294mg
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Entry
EUTSA_v10020294mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10020294mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10020294mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020294mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10020294mg
Spliceosome [BR:
eus03041
]
Complex A
U1 snRNP components
U1 related factors
EUTSA_v10020294mg
Complex B
EUTSA_v10020294mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10020294mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18024529
NCBI-ProteinID:
XP_006408521
UniProt:
V4M1H8
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MAATATASAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPIGSQPPKFAAA
PVSSSVQAQQTSSGANGSYGLVKDDDKYSRGSDGGPKIEPGSRFTEVGRSGAPYSNGAAN
GVGNSAYGASARGPPPSSAPANELSPEVYCRRHEITVSGGQVPPPLMSFETTGFPPELLR
EVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGP
TILVLSPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRL
NDILEMRRISLRQVSYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRK
IAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCS
TKRMCDQLTRNITRQFGAAAIHGDKSQPERDSVLNQFRSGRTPVLVATDVAARGLDVKDI
RAVINYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQ
IREMATRGGGGMNKFSRWGPPSGGRGGRGGDSGYGGRGGSFGSRDSNGWGRERERSRSPE
RFNRAPPPSSTGSPPRSFHESMMMKHR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgcaactgcttctgcagtccgatacgcacctgaggatcattctcttccc
aagccttggaaaggccttgtggatgataggactggttatctgtacttttggaatccagag
accaatgttactcagtatgagagaccaattggctctcaacctcccaagtttgctgctgcg
cctgtaagctcctccgttcaggctcaacaaacttcttccggagccaatgggagctatggt
cttgtcaaggatgatgacaagtacagcagaggcagtgacggtgggcctaagattgagccc
gggtccagatttactgaggttggcaggagtggagcgccctattcgaatggtgctgcaaat
ggagtcggaaattctgcatacggtgcctctgcaagaggtccacctccttcatcagcgcca
gcaaatgaactttcccctgaggtctattgccgccgtcatgaaattactgtcagtggaggc
caagtaccaccacctctaatgtcctttgaaactacaggttttcctcctgagctactgcgg
gaggtactcagtgcaggtttctctgctccaactccaatccaagctcagtcttggccaatt
gcgatgcaaggtagggacatagtagccattgctaaaactggctcgggaaaaactctgggt
tacttgattcctggctttctgcatcttcaacgcatccggaatgattcgcgaatgggcccg
actatattggtattgtctccaacgagggaactggctacacaaattcaagacgaagctgtc
aaatttgggaggtcatcaagaatttcgtgtacgtgtttgtatggtggtgcaccaaagggc
cctcagctgagggatttggaaagaggagcagatatcgtggttgcaactcctggacgattg
aatgatatccttgagatgaggagaattagtctgcgtcaagtatcttatcttgtgctagat
gaggcagatagaatgttggacatgggtttcgaaccgcagataaggaagattgtgaaagag
atcccaactaagcgtcaaacccttatgtacactgctacatggccgaagggcgtcaggaaa
attgcagctgacttgcttgttaaccctgctcaggtcaacattggcaacgtcgacgagctt
gtggcaaacaagtcgatcacacagcacattgaagttgtagcaccaatggagaaacaaagg
aggctagagcagatattacggtctcaggaaccaggctcaaaggtgataatattctgctca
accaaaaggatgtgtgaccaactaactcgcaatataacccgccaatttggagctgctgct
atacatggagacaagtctcagcctgagagagacagtgttctgaatcaattccgcagtggc
aggactccggttcttgttgcaactgatgttgctgctcgtgggctggacgttaaggacatc
agggcggtcatcaactacgatttccccaatggagtggaagactatgttcatagaatcgga
agaacaggaagagctggagcgactggtcaggcattcacattctttggtgatcaagactcg
aaacatgcctcagatctgataaagatcttggaaggcgcaaaccagcgagttcctcctcag
atccgcgaaatggccacacgcggtggtggtggaatgaacaaattcagtcgatggggtcct
ccttccggaggtcgaggtggtcgtggtggcgactctggttatggtggcagaggtggtagc
tttggttcacgtgacagcaatggatggggaagagagcgtgaaaggagccgtagcccggag
agattcaacagagctccaccaccgtcttccactggatctcctcctcgcagcttccacgag
tctatgatgatgaaacatagataa
DBGET
integrated database retrieval system
