Eutrema salsugineum (saltwater cress): EUTSA_v10020346mg
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Entry
EUTSA_v10020346mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10020346mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10020346mg
03110 Chaperones and folding catalysts [BR:
eus03110
]
EUTSA_v10020346mg
03029 Mitochondrial biogenesis [BR:
eus03029
]
EUTSA_v10020346mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10020346mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EUTSA_v10020346mg
Messenger RNA biogenesis [BR:
eus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EUTSA_v10020346mg
Chaperones and folding catalysts [BR:
eus03110
]
Heat shock proteins
HSP60 / Chaperonin
EUTSA_v10020346mg
Mitochondrial biogenesis [BR:
eus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EUTSA_v10020346mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EUTSA_v10020346mg
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10020346mg
Exosomal proteins of breast cancer cells
EUTSA_v10020346mg
Exosomal proteins of colorectal cancer cells
EUTSA_v10020346mg
Exosomal proteins of bladder cancer cells
EUTSA_v10020346mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
18025003
NCBI-ProteinID:
XP_006407212
UniProt:
V4LDY5
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MASTFTATSSLGSLVAPNAHKLSSANSISSSSFGRRQNVCPRRSRPAIVCAAKELHFNKD
GTTIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVH
ELKLMSKEVEDSELADVAAVSAGNNPEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGSTQEAVNKRVVQIKNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIK
DTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgactttcactgcaacgtcgtcccttggttccttggttgctcccaatgcgcac
aagttgtcttctgcgaactctatctcttcaagctcttttggaaggagacagaatgtgtgc
ccaagaagatcccggcctgcgatagtatgtgcagccaaggagttgcatttcaacaaggat
gggactacgataaagaaacttcaaaccggtgttaacaagctcgctgacctcgttggtgtc
acacttgggccgaaagggagaaatgttgttcttgagagcaagtatggatcaccaagaatt
gttaatgatggtgtgaccgtggctagggaggtcgagttggaggacccggttgagaacatt
ggtgcaaagcttgtaaggcaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacttctgttgttcttgcacaaggttttattgctgagggtgtcaaggtggtggctgcg
ggtgcaaaccctgtactgatcactagaggcattgagaagacagctaaggctttggttcac
gagctgaagctaatgtctaaggaggttgaagacagtgaacttgcagatgtggcggctgtt
agtgctggtaacaaccctgaagtcggaagtatgattgctgaagcaatgagcaaagtgggc
aggaagggtgtggtgacccttgaggagggaaaaagcgctgagaacaacctttacgttgtg
gaaggaatgcaatttgaccgtggttatatctccccatactttgtgacagacagtgagaaa
atgtctgtcgagtacgataattgcaagttgcttcttgttgacaagaaggttaccaatgca
agggatctggttggtgttctagaggatgcgattagaggcggatacccaatcctaattatt
gcagaagacattgaacaagaagctttagctactcttgttgttaacaagcttcgaggcaca
ttgaagatcgcagctctcaaagctcctggatttggagagcgcaagagccaataccttgac
gatattgccattcttactggagcaactgtgataagagaggaagttggtctttctcttgac
aaagctggaaaagaggttttgggtaacgcctctaaggttgtcctcaccaaagagatgacg
accattgtgggcgatgggtccacacaggaagcagtgaacaagcgtgttgttcagattaag
aatcttattgagcaagcggagcaagactacgagaaggaaaaattgaatgagagaattgcg
aagctttctggtggagttgctgtaattcaggttggagcacaaactgagacagagcttaaa
gaaaagaagttaagagttgaagatgctcttaacgctacaaaggctgcggttgcggaaggt
attgtcgttggtggtggttgcactctacttcgtcttgcggccaaggttgatgccatcaag
gacacccttgaaaacgatgaagagaaggttggagcagaaatcgttaaaagagcactgagt
taccctctgaaattgattgcaaagaatgccggtgttaacggaagcgttgtgagcgagaag
gtgttagctaacgacaatgtgaaattcggatacaatgctgcaaccggaaagtatgaagat
ctgatggctgcaggaatcatcgacccaacaaaggttgtgagatgttgcttggaacatgcg
gcatcggttgcaaagacgttcttgatgtctgactgtgtggttgtcgagatcaaggagcca
gagccagttccggctggcaacccaatggacaactcaggatatggatactga
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