KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10020346mg
Entry
EUTSA_v10020346mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EUTSA_v10020346mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10020346mg
   03110 Chaperones and folding catalysts [BR:eus03110]
    EUTSA_v10020346mg
   03029 Mitochondrial biogenesis [BR:eus03029]
    EUTSA_v10020346mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eus04147]
    EUTSA_v10020346mg
Enzymes [BR:eus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     EUTSA_v10020346mg
Messenger RNA biogenesis [BR:eus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EUTSA_v10020346mg
Chaperones and folding catalysts [BR:eus03110]
 Heat shock proteins
  HSP60 / Chaperonin
   EUTSA_v10020346mg
Mitochondrial biogenesis [BR:eus03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    EUTSA_v10020346mg
Exosome [BR:eus04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   EUTSA_v10020346mg
  Exosomal proteins of other body fluids (saliva and urine)
   EUTSA_v10020346mg
  Exosomal proteins of breast cancer cells
   EUTSA_v10020346mg
  Exosomal proteins of colorectal cancer cells
   EUTSA_v10020346mg
  Exosomal proteins of bladder cancer cells
   EUTSA_v10020346mg
SSDB
Motif
Pfam: Cpn60_TCP1 KH_PARP14_2
Other DBs
NCBI-GeneID: 18025003
NCBI-ProteinID: XP_006407212
UniProt: V4LDY5
LinkDB
Position
Unknown
AA seq 596 aa
MASTFTATSSLGSLVAPNAHKLSSANSISSSSFGRRQNVCPRRSRPAIVCAAKELHFNKD
GTTIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVH
ELKLMSKEVEDSELADVAAVSAGNNPEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGSTQEAVNKRVVQIKNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIK
DTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggcatcgactttcactgcaacgtcgtcccttggttccttggttgctcccaatgcgcac
aagttgtcttctgcgaactctatctcttcaagctcttttggaaggagacagaatgtgtgc
ccaagaagatcccggcctgcgatagtatgtgcagccaaggagttgcatttcaacaaggat
gggactacgataaagaaacttcaaaccggtgttaacaagctcgctgacctcgttggtgtc
acacttgggccgaaagggagaaatgttgttcttgagagcaagtatggatcaccaagaatt
gttaatgatggtgtgaccgtggctagggaggtcgagttggaggacccggttgagaacatt
ggtgcaaagcttgtaaggcaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacttctgttgttcttgcacaaggttttattgctgagggtgtcaaggtggtggctgcg
ggtgcaaaccctgtactgatcactagaggcattgagaagacagctaaggctttggttcac
gagctgaagctaatgtctaaggaggttgaagacagtgaacttgcagatgtggcggctgtt
agtgctggtaacaaccctgaagtcggaagtatgattgctgaagcaatgagcaaagtgggc
aggaagggtgtggtgacccttgaggagggaaaaagcgctgagaacaacctttacgttgtg
gaaggaatgcaatttgaccgtggttatatctccccatactttgtgacagacagtgagaaa
atgtctgtcgagtacgataattgcaagttgcttcttgttgacaagaaggttaccaatgca
agggatctggttggtgttctagaggatgcgattagaggcggatacccaatcctaattatt
gcagaagacattgaacaagaagctttagctactcttgttgttaacaagcttcgaggcaca
ttgaagatcgcagctctcaaagctcctggatttggagagcgcaagagccaataccttgac
gatattgccattcttactggagcaactgtgataagagaggaagttggtctttctcttgac
aaagctggaaaagaggttttgggtaacgcctctaaggttgtcctcaccaaagagatgacg
accattgtgggcgatgggtccacacaggaagcagtgaacaagcgtgttgttcagattaag
aatcttattgagcaagcggagcaagactacgagaaggaaaaattgaatgagagaattgcg
aagctttctggtggagttgctgtaattcaggttggagcacaaactgagacagagcttaaa
gaaaagaagttaagagttgaagatgctcttaacgctacaaaggctgcggttgcggaaggt
attgtcgttggtggtggttgcactctacttcgtcttgcggccaaggttgatgccatcaag
gacacccttgaaaacgatgaagagaaggttggagcagaaatcgttaaaagagcactgagt
taccctctgaaattgattgcaaagaatgccggtgttaacggaagcgttgtgagcgagaag
gtgttagctaacgacaatgtgaaattcggatacaatgctgcaaccggaaagtatgaagat
ctgatggctgcaggaatcatcgacccaacaaaggttgtgagatgttgcttggaacatgcg
gcatcggttgcaaagacgttcttgatgtctgactgtgtggttgtcgagatcaaggagcca
gagccagttccggctggcaacccaatggacaactcaggatatggatactga

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