Eutrema salsugineum (saltwater cress): EUTSA_v10020409mg
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Entry
EUTSA_v10020409mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020409mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10020409mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10020409mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
18023413
NCBI-ProteinID:
XP_006407496
UniProt:
V4LYK0
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MDSSPNTNKALTETRFSDLKPWLSDDIIAALDRSDFEFCTPVQAETIPLLCSYKDVVVDA
TTGSGKTLAFLLPLVEILRRSTSSNPPKPHQVMGVIISPTRELARQIYNVAQPFVSTLSN
VNSVLLIGGRKVRAGMETVEEEGGNVLIATPGKLLAIMNRMDTLDFRHLEMRRVNEIISR
LPKQRRTGLFSATQTEGVEELAKAGLRNAVRVQVRAESKSEQFTNSITPCGLHLEYLICQ
ADQKSAQLVDLLIENKSQKLIVYFMTCACVDYWGLLLPQIPTLKSISFNLFHGDLKQNAR
YKALASFAEASSGVLLCTDVCARGLDIPGVNYIVQYDPPQKPDVFIHRVGRTARLGRQGR
SIVFLLPEEEDYRRCPENASDVIPIIRSAAIEDRAVFKKGKKAFVSFIHAYKEHDCPYIF
RLRELQAGKLAMAYGLLKFPAMSEVRQHRLSIVGFTPVQGINFEDIKFKDKSLEKQRQQN
LQARKEKRERGKKSSKKVVDASATNDSCKVELRKRKLTGKQRRTIQTAEDEEELALEARL
IKKVKKGLITEDELEELMIKSY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggactcatcgccgaacactaacaaagcgttaacggagacgcgtttctccgatctcaaa
ccttggctttccgacgatataatcgcggcgcttgaccggtccgatttcgagttctgcact
ccggttcaggcggagacgatccctttactctgcagctacaaggatgttgtcgtcgacgcg
accaccggttctgggaaaaccctagctttcctcctccccctcgtagagattctccgtcga
tccacttcctccaaccctccgaagcctcaccaggttatgggggtgattatatcgccaacg
agagagctagcaaggcagatatataacgtggcacagccatttgtttcgactttgtccaat
gtgaactctgtgctgcttattggaggccgaaaggtgagagctggcatggagaccgtcgaa
gaagaaggaggcaatgtcttgatcgctacgcctggaaagcttttagctataatgaatcga
atggacactctagatttcagacatcttgagatgaggcgggtgaatgagattatatctcgc
ttgccaaagcaacgtaggactggcctcttttcagctacacagacagaaggtgttgaagag
ctggccaaggctgggcttaggaacgctgttagagtccaagttcgagctgagtcaaagtcg
gagcaattcacaaactcgataacgccttgtggtctgcatcttgagtatttgatatgccaa
gcagatcaaaaatcagcacaactagtggatctcctgatcgagaacaaaagtcaaaagctt
atcgtatacttcatgacctgtgcttgtgttgattactggggactcctacttccacaaatt
cctaccctcaagtccatatctttcaatcttttccatggggacctgaagcagaatgctaga
tacaaggcattagcttcgtttgcagaggcatcaagcggtgttcttctgtgcacagatgtc
tgtgcacgtggacttgatattccaggcgtcaattatatagttcagtatgatcccccacaa
aaaccagatgttttcatccacagggttggcagaactgcaagattgggaagacaagggagg
tccattgtgtttttactgcccgaggaggaagactatagaagatgtcctgagaatgcatcc
gatgtcatcccgattatacgttcagctgccatcgaggaccgggcagtgtttaagaaggga
aagaaggcatttgtttcctttatccatgcttataaggagcatgattgcccttacatcttc
agattgagagagctgcaagcaggaaagttagcaatggcgtatggcctcttgaaatttcct
gccatgtctgaagttaggcaacacagacttagcattgtcggttttacacccgttcaaggc
atcaactttgaggacatcaaattcaaggacaaatctctggagaaacagaggcagcaaaac
ttacaagcaaggaaagagaaaagagagagaggcaagaaaagctcgaaaaaggtggttgac
gcgtctgctactaatgattcttgcaaggtggagttgagaaagagaaagctaacaggaaag
cagagacgaaccatccaaacagctgaagatgaagaagagctggctctagaggctcggtta
ataaaaaaggtgaagaaagggttgattacggaagatgaattagaggagctgatgattaaa
tcttattaa
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integrated database retrieval system
