Eutrema salsugineum (saltwater cress): EUTSA_v10020468mg
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Entry
EUTSA_v10020468mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10867
nibrin
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10020468mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10020468mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10020468mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
EUTSA_v10020468mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
EUTSA_v10020468mg
BRCA1-C complex
EUTSA_v10020468mg
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
18023804
NCBI-ProteinID:
XP_006408393
UniProt:
V4NT08
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MVWGLFPVDPLSGEDKYYIFSKGNYKIGRKGCDIIINKDKGVSRVHAELAFDATALSTSR
RNKSSDPSFVIRVKDYSKYGTFIKTDLGEKYKVHELPDKEKILKDGDVITFGTGAATYRL
SLVPLVFYFCLSSETVKVDRSVQDSISSIGARIAPTLSEECTHVLVEPRMQVNEALVNAI
LAKKPIILTNWVKLLAEKSIRSDIPGYSQYRPSVMVEEALVDVIEPNIREKCLEGFTFVL
EPADTYRFGSSFPSLLKVCGAETVGVADVSSMSQESQYGETNRMICVIPKSSGDKFGRLK
HLSLLSRVNEMDLICAILSGNLPSTSLIPPSVVISSSCSTDETVVADSDAEEEETTSSVH
MIDATEKAETPEDPAAIVIEESPVTILEETMNLNEFKSVNLLIDTETKGYSDEKIPSDSV
RDVTIRRDQNDEAECGNSEIIYTQDLIVRDLRSIRNVRSTGEEGVVDFKRFRKGNVTSGN
SFSSLIPFAKDPYKEYDSGEVTDFMREEKKRKQMEAVAEDLFNNEKARKRGTAGSIRGFL
TRG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgttgatcccctctcaggtgaagataaatactatatcttt
tcaaaagggaattacaagattggtcgaaaaggatgtgacataattatcaataaggataag
ggggtatctagggtccatgcagagttagctttcgatgcaacagctctttcaacctctcgg
aggaacaaatcttcagatccctcatttgttatccgcgtaaaagactattcaaaatatggg
acctttatcaaaactgacctcggggaaaaatataaagttcatgagctacctgacaaggag
aaaattctcaaagatggagatgttatcacatttggtacaggtgcagcaacttacaggttg
tctttagttccgctggtgttttacttctgcctttcctctgagaccgttaaggtggatcgg
tcggtacaagattcaatttcgtcaatcggtgctcgtattgctccaaccttgagtgaggag
tgcacccatgttcttgttgaaccgcgtatgcaagtgaatgaagctctagtcaatgcaatt
ttagccaaaaaacccatcattttgacgaattgggttaagcttctcgcagagaaaagtatc
cgcagcgacattcctggatacagccaatacagaccatcggtgatggtggaagaagctttg
gtggatgtaatagaaccaaacatccgtgaaaaatgtcttgaaggatttacttttgtgctg
gaaccagcagacacgtacagatttggaagcagcttcccatctttgctgaaagtatgtggc
gcagagactgttggcgtagcagacgttagctccatgagtcaggagtctcagtatggagaa
actaatcgcatgatatgtgtcatcccaaaaagttcaggagacaaatttggccgattaaag
catctcagtctgttatctagagtgaacgaaatggatttaatatgcgctatcttgtccgga
aatctaccttcgacttcgttgataccaccttccgttgtaatttcatcatcgtgctctacg
gatgagacagttgtagcagattctgacgccgaagaggaagaaacaacatcgtctgttcat
atgatcgatgccactgaaaaggcagaaacaccggaggatcctgctgctattgtgatagag
gagagtcctgttacgatattggaagaaacaatgaatttgaatgagtttaaaagcgtaaac
ttattgatagatactgaaaccaaaggctacagtgatgagaagatcccaagtgatagtgtc
cgtgatgtgacaattcgaagggatcaaaatgatgaggctgaatgtgggaactcggagatt
atctacactcaagatcttattgttagggatttgcgatcaattagaaatgttcggtctaca
ggcgaggaaggagttgttgactttaagagattcagaaagggaaatgttacatccggaaac
agcttcagtagcctgataccattcgccaaggatccatacaaagaatatgatagcggggaa
gtgacagattttatgagagaagagaagaagaggaagcagatggaagccgttgcagaggac
ttgtttaacaatgaaaaggctagaaagcgtggaacggctggttccattcgcgggtttctc
actcgaggttga
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