KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10020478mg
Entry
EUTSA_v10020478mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10020478mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    EUTSA_v10020478mg
SSDB
Motif
Pfam: BING4CT WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 ANAPC4_WD40 Beta-prop_EML WDR55 EIF3I Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd Cytochrom_D1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WDR54 Mala_s_1-like Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 18023417
NCBI-ProteinID: XP_006407555
UniProt: V4M9G3
LinkDB
Position
Unknown
AA seq 536 aa
MKLNSEDNILMEKVLPPDEQEIDVELEAKEKKYLRGGAVNLESLKDKKLKTKVASREKFF
GKSAKTAAKIEKWLLPNKGGGLETDGLEKTWHIDQLKISKEVDILSSRKLYDVVLPDLGP
YKLDFSASGRHMVLGGRKGHIALLDMMDLKLIKEIQVRETVRDVAFLHNDQLFAAAQKKY
AYIYGRDGTEVHCLKERGPVARLRFLKNHLLLASVNKIGQLHYQDLTHGEMVASFRTGKG
RTDVMEVNPYNGVVALGHSGGTVTMWKPTSQVPLVQLHCHPGPVSSVAFHPNGHLMATSG
KERKVKIWDLRKFGEVKTIDGFHAKTLSFSQKGLLAAGTGSFVQVLSDSSGDSSHKYTRY
MNHSMVKGYQIEKLMFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRRE
KEVHMLLDKLPPETIMLDPSQIGAMRPSRRKEKPTRGEIEAEKEVAIEAAKSIELKNKTK
GRNKPSKRTKKKKEMVENAKRTFPEQEHNKAVKKRRIGEDAAAELPTSLKRFARKK
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgaagctcaattcagaggataacattctcatggagaaggttttgcctcctgatgagcag
gagattgatgttgagttggaggctaaagaaaagaaatatcttagaggaggagctgttaat
ctagagtcattgaaagataaaaaactaaagacaaaggttgcttcacgagaaaagtttttt
ggaaaatctgcaaaaactgctgccaaaatcgagaaatggctcttgccgaataagggaggg
ggcttggagactgatggtctagagaagacatggcatattgatcagctaaaaatttccaaa
gaagtggatatattaagctcaagaaaactatatgacgtagtgctcccagatcttggccct
tacaaacttgatttttctgcaagtggtcggcatatggtacttgggggtcgcaaaggccac
attgctcttctagacatgatggatcttaagttaattaaagagatccaggtaagagaaaca
gtacgtgatgttgcattccttcacaatgaccaattgtttgcagctgcccagaagaagtat
gcttatatttatgggagagatggaactgaggtgcattgtctaaaggaacgtggtccagtg
gccagacttcggttcctaaagaaccatttgctgcttgcgtcagtaaacaaaattgggcag
ctacattatcaagacttaacccatggtgagatggtggctagttttcgaacaggtaaaggc
cgaacagatgtaatggaagtgaatccttacaatggtgttgttgccttgggacattctggt
ggaaccgtcacaatgtggaaacccacaagccaagtacctctagtccagttgcactgtcac
cctgggccagtctcatctgtcgcgtttcatccaaatggccatctcatggctacatcgggt
aaagagcgcaaagtcaagatctgggatttgcgtaaattcggggaagttaagaccattgac
ggtttccacgccaaaacgctgagtttcagtcagaaaggtttgctagcagctggaactgga
tcttttgttcaggttttgagtgattcgagtggtgactcttcacataagtatactagatac
atgaaccactcgatggtgaaaggttaccagattgagaagcttatgttcaggccatacgag
gatgttctcgggattggtcactcgatgggttggtctagcattctgattccagggtctgga
gaacccaatttcgattcatgggtggctaatccgtttgaaacatcgaaacagagacgggag
aaggaagtccatatgcttcttgataaacttccacctgagacaatcatgctcgatccttcg
cagattggtgcgatgaggccatcgaggaggaaagagaagccaacaagaggagagatagaa
gctgagaaagaggtggccatagaagcggcaaagagcattgagctgaagaacaagaccaaa
ggaaggaacaaaccaagcaagaggaccaagaagaagaaagagatggtggagaacgcgaag
cgaacattcccggagcaagagcacaacaaggcagttaagaagagaagaatcggtgaagat
gctgcggcagagctacccacaagtttgaaaaggtttgcccgaaaaaaatga

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