Eutrema salsugineum (saltwater cress): EUTSA_v100205851m
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Entry
EUTSA_v100205851m CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
eus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v100205851m
04120 Ubiquitin mediated proteolysis
EUTSA_v100205851m
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v100205851m
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v100205851m
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EUTSA_v100205851m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_16
zf-HC5HC2H
zf_RING_Vps8
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
18024273
NCBI-ProteinID:
XP_006406879
UniProt:
V4M0J9
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
LMEILFAVTIFRQDFSSGFLPLVVTLLLIKALHWLAQKRVEYIETTPSVTKLSHVRIVSF
MGFLLLVDSLFMYSSVRHLIQSRQASVSLFFSFEYMILATTTVAIFVKYVFYVTDMIMDG
QWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYGVPLHLLRELYETFRNFQIRVSDYL
RYRKITSNMNDRFPDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQ
TCPTCRALVVPPENAASAPAGQRGLHQGSQQAGTSSSGAQGSETHSSAGGSNDNMNRHHA
RLQAAASAASMYGKSMVYPSANKVSWSPGFPGKEQVSTEPHGTHLSSSARSQLPQHNVAG
ENSRAYANIPEAKLEDMKKSLETHLEILRNRLNFLEKRKTESTGEADNKGKMVADASLDG
AE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
ctcatggagattctcttcgccgttactatttttcgacaggacttctctagtgggtttctt
cctttggtcgtcactcttctgcttatcaaggctttacattggcttgcccagaaaagagtt
gaatacattgagaccactccttctgtgaccaagctctctcatgttcgtattgtctccttc
atggggttccttcttcttgtggatagtctctttatgtatagttctgtacgtcacttgatt
cagtcgcgtcaggcttcggtttctctcttcttctccttcgagtatatgatcctggcgaca
acaactgttgcgatttttgtgaagtatgttttctatgtcactgatatgatcatggatggt
caatgggagaagaaacctgtttatactttctatcttgagcttatccgtgacctgcttcac
ttgtcgatgtatatatgcttcttctttgtcatattcatgaactatggcgtgcctttgcac
ttgttgcgagagctctacgaaaccttcaggaacttccagattcgtgtctccgattacctt
cgttatcgtaaaatcacttccaatatgaacgacaggtttcctgatgcaactcccgaagaa
cttaccgcaagtgatgccacatgtatcatatgccgtgaagaaatgacaaatgcgaagaag
ctaatctgcggacatctctttcatgtgcattgtctacgatcatggttggaacggcagcag
acatgtcccacttgcagagcacttgttgtacctcctgaaaatgccgcatctgcacctgca
ggccaacgcggtttacaccaaggttctcaacaagcaggtacttcaagctcaggtgcccag
ggctctgaaacacattcttctgctggcggttccaatgacaatatgaacaggcaccacgcc
aggcttcaagcagcagcttctgcagcatccatgtacgggaaatcaatggtttatccatct
gcaaacaaagtatcatggtcgccgggttttcctggtaaagagcaagtgtcaactgaacca
catggaactcatctttcatcctctgcccgatctcagcttcctcaacacaatgttgctggt
gaaaactctcgtgcctatgcaaatatcccagaggctaagctggaagatatgaaaaaatct
ctcgagacccatctcgagattttgcgaaaccgacttaattttctggagaagaggaaaacg
gaatccacaggcgaagcagataacaaagggaaaatggttgcggatgcgtctctagatgga
gcagagtga
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