KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v100205851m
Entry
EUTSA_v100205851m CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04120  Ubiquitin mediated proteolysis
eus04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EUTSA_v100205851m
   04120 Ubiquitin mediated proteolysis
    EUTSA_v100205851m
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v100205851m
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v100205851m
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v100205851m
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-ANAPC11 zf-RING_5 zf-RING_11 zf-RING_16 zf-HC5HC2H zf_RING_Vps8 zf-RING-like Prok-RING_4
Other DBs
NCBI-GeneID: 18024273
NCBI-ProteinID: XP_006406879
UniProt: V4M0J9
LinkDB
Position
Unknown
AA seq 422 aa
LMEILFAVTIFRQDFSSGFLPLVVTLLLIKALHWLAQKRVEYIETTPSVTKLSHVRIVSF
MGFLLLVDSLFMYSSVRHLIQSRQASVSLFFSFEYMILATTTVAIFVKYVFYVTDMIMDG
QWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYGVPLHLLRELYETFRNFQIRVSDYL
RYRKITSNMNDRFPDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQ
TCPTCRALVVPPENAASAPAGQRGLHQGSQQAGTSSSGAQGSETHSSAGGSNDNMNRHHA
RLQAAASAASMYGKSMVYPSANKVSWSPGFPGKEQVSTEPHGTHLSSSARSQLPQHNVAG
ENSRAYANIPEAKLEDMKKSLETHLEILRNRLNFLEKRKTESTGEADNKGKMVADASLDG
AE
NT seq 1269 nt   +upstreamnt  +downstreamnt
ctcatggagattctcttcgccgttactatttttcgacaggacttctctagtgggtttctt
cctttggtcgtcactcttctgcttatcaaggctttacattggcttgcccagaaaagagtt
gaatacattgagaccactccttctgtgaccaagctctctcatgttcgtattgtctccttc
atggggttccttcttcttgtggatagtctctttatgtatagttctgtacgtcacttgatt
cagtcgcgtcaggcttcggtttctctcttcttctccttcgagtatatgatcctggcgaca
acaactgttgcgatttttgtgaagtatgttttctatgtcactgatatgatcatggatggt
caatgggagaagaaacctgtttatactttctatcttgagcttatccgtgacctgcttcac
ttgtcgatgtatatatgcttcttctttgtcatattcatgaactatggcgtgcctttgcac
ttgttgcgagagctctacgaaaccttcaggaacttccagattcgtgtctccgattacctt
cgttatcgtaaaatcacttccaatatgaacgacaggtttcctgatgcaactcccgaagaa
cttaccgcaagtgatgccacatgtatcatatgccgtgaagaaatgacaaatgcgaagaag
ctaatctgcggacatctctttcatgtgcattgtctacgatcatggttggaacggcagcag
acatgtcccacttgcagagcacttgttgtacctcctgaaaatgccgcatctgcacctgca
ggccaacgcggtttacaccaaggttctcaacaagcaggtacttcaagctcaggtgcccag
ggctctgaaacacattcttctgctggcggttccaatgacaatatgaacaggcaccacgcc
aggcttcaagcagcagcttctgcagcatccatgtacgggaaatcaatggtttatccatct
gcaaacaaagtatcatggtcgccgggttttcctggtaaagagcaagtgtcaactgaacca
catggaactcatctttcatcctctgcccgatctcagcttcctcaacacaatgttgctggt
gaaaactctcgtgcctatgcaaatatcccagaggctaagctggaagatatgaaaaaatct
ctcgagacccatctcgagattttgcgaaaccgacttaattttctggagaagaggaaaacg
gaatccacaggcgaagcagataacaaagggaaaatggttgcggatgcgtctctagatgga
gcagagtga

DBGET integrated database retrieval system