Eutrema salsugineum (saltwater cress): EUTSA_v10020740mg
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Entry
EUTSA_v10020740mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Module
eus_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10020740mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
EUTSA_v10020740mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
18025340
NCBI-ProteinID:
XP_006406925
UniProt:
V4M7N1
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MFILQIFTSSTALDVTQFGAIGDGVTDDSQAFLKAWEVVCSGTGDGQLVVPAGMTFMLQP
LNFQGSCKSTPVVVQILGNLVASSKGKWKGDKDQWILFTDIEGLVVEGGGEINGQGSSWW
EHKGSRPTALKFKSCNNLRLSGITHVDSPMAHIHINQCNDVSISNLRINAPESSPNTDGI
DVAASSNVIIQDCIIATGDDCIAINSGTSNIRISGIDCGPGHGISIGSLGKDGETASVEN
VCVQNCNFRGTMNGARIKTWPGGSGYARMITFHGITLDNVENPIIIDQHYNNGGSEKTKD
DKSSAVEVSKVMYSNFVGTSKSEYGVDFRCSQSVPCTDIFMRDVRIETATSGQGQVAQGQ
CLNVRGVSTLALPGLECLAISTDMLSSAELPEQTCALPQSVQPNTLPLQDPLWVYGSGGK
RLRVYSVVLTSFISLVIFVLG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttcattctccaaatcttcacatcttcgacagcattggatgttactcaatttggagcg
attggagatggagttacagacgattcgcaggcgttcttgaaagcttgggaagttgtctgt
agcgggacaggagatgggcagcttgtcgttccggcagggatgacatttatgttacagccc
ttgaattttcaaggttcttgtaaatccacccctgtagttgttcagattttgggcaatctg
gttgcatcgagtaaagggaaatggaaaggggacaaagatcaatggattctatttacagat
atcgaaggacttgtggttgaaggtggtggcgaaataaacggccagggttcgagctggtgg
gaacacaaaggcagtagaccaaccgcattgaagttcaagagctgcaacaaccttagattg
agtggaataacacatgtagatagtccaatggctcacattcatataaaccaatgcaacgat
gtgagcatctcaaatctccggataaatgcgccggaatcaagtcctaacaccgatggaatc
gatgtcgccgcttcttccaatgttattatccaggattgcatcatcgccactggtgacgat
tgcattgccataaactcggggacgtctaacatcagaatttccggaatagattgcggacca
ggccatggaataagcataggaagtttgggaaaagatggagagacggcttcggtggagaat
gtatgtgtccaaaactgtaactttagaggaactatgaatggtgctaggatcaaaacctgg
ccgggaggatcgggttacgcgagaatgattactttccatggaattactctagataatgtc
gaaaatccgatcataatcgatcagcattacaacaacggaggttctgaaaaaaccaaagat
gataagtcgtcggctgtggaagtgagcaaagttatgtacagtaatttcgtggggacgtcc
aagtcagagtacggtgttgactttaggtgcagccagagtgtaccgtgcacagatattttt
atgagagacgtgagaatagaaacggcaacatcaggacaaggacaagtcgcgcaaggacaa
tgtttaaacgtgagaggtgtgtccacgcttgccttaccaggactagagtgcttagccatt
tccacagatatgttgtcatcggcggaactgccggaacaaacctgtgctttgccgcaatca
gtgcaaccaaatacactaccgttgcaagatccattatgggtttatggaagcggaggaaaa
cgactcagagtttacagtgtcgtattaacttcatttatctctctggttatatttgtttta
ggttaa
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