Eutrema salsugineum (saltwater cress): EUTSA_v10020832mg
Help
Entry
EUTSA_v10020832mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03015
mRNA surveillance pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10020832mg
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10020832mg
03015 mRNA surveillance pathway
EUTSA_v10020832mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10020832mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10020832mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020832mg
03012 Translation factors [BR:
eus03012
]
EUTSA_v10020832mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10020832mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EUTSA_v10020832mg
mRNA cycle factors
Stress granule specific factors
EUTSA_v10020832mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
EJC/TREX
EUTSA_v10020832mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Helicases
EUTSA_v10020832mg
Translation factors [BR:
eus03012
]
Eukaryotic type
Initiation factors
eIF-4
EUTSA_v10020832mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Utp25_C
CMS1
AAA_22
Helicase_RecD
Flavi_DEAD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
18025364
NCBI-ProteinID:
XP_006406464
UniProt:
V4LZG1
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAEASMSNPGRGGGRRGGGPMDDDKLVFETTEGIEPITSFNDMGIKEDVLRGVYEFGFEK
PSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQIVDTSTREVQALILSPTRELAS
QTEKSIQAIGLHASIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRA
IKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTDPVKIL
VKRDELTLEGIKQFFVAVEKEDWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMRSN
NFTVSSMHGDMPQKERDEIMNQFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNREL
YIHRIGRSGRFGRKGVAINFGKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgagcatgtcgaatcctggccgtggaggcggtaggagaggcggcggacca
atggatgacgacaagctggtcttcgagactaccgaagggatcgagcccatcaccagtttc
aatgatatggggattaaagaggatgtgcttcgcggcgtctacgagttcggtttcgagaag
ccatctgcgattcagcagagagcggtgatgccgattctccaagggcgcgatgttattgct
caagctcagtccggtaccggaaaaacctctatgattgctctctccgtctgccaaatcgtt
gacacgtcgactagagaggttcaggccttaatattatcaccaacgagagagctggcttca
caaacagagaagtcgatacaagctattggactacacgccagtatccaagcacatgcatgc
atcggtgggaagagcgttggagaagacatcaggaagctggagcatggtgtccatgttgtg
tctgggacacctggccgtgtctgtgatatgataaagaggagaagtctacgtaccagagct
attaaacttttgattcttgatgaatcggatgaaatgctgagcagagggttcaaggaccaa
atctatgatgtttacagatatctcccacccgatctacaggtctgcttggtttctgcaact
cttcctcacgagattttggagatgacatccaagtttatgacggatccagtgaagatactt
gtgaagcgtgatgagttgactctggaaggcattaaacaatttttcgttgctgttgagaag
gaggattggaaatttgatacactctgtgatctttatgacacacttactattactcaagct
gttatcttctgcaacacaaaacgaaaggtggattggttaagtgagaagatgaggagtaat
aactttacagtctcatcaatgcacggcgacatgcctcagaaggagagagatgagatcatg
aaccagtttcggtcaggcgacagtcgtgttttgatcacgacagatgtatgggcacgtggg
attgatgtgcagcaagtttctcttgtcatcaattatgatctccccaacaaccgtgagctc
tacattcatcgtattggacggtctggtcgtttcgggcgtaagggtgttgcgatcaacttt
ggtaaaagcgacgacatcaagatcctccgggacattgagcagtactacagtacccagatt
gacgagatgccaatgaatgtagctgatcttatctaa
DBGET
integrated database retrieval system
