Eutrema salsugineum (saltwater cress): EUTSA_v10020885mg
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Entry
EUTSA_v10020885mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020885mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10020885mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Helicases
EUTSA_v10020885mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
18023845
NCBI-ProteinID:
XP_006407645
UniProt:
V4M9N4
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MEKSVSFLFGGTNFNRKKFAPDFAKFKNCTEEDDDSNKKLSFFEEEEEPEKKKNIVSSKK
RKRKSANSEPVEGFDVFKSSKKALVEGKKEEQNTKNEILENSKKELNQRMEKDALSRKQY
NIHVSGNNIPPPLKSFAELSSRYGCKRYILRNLAELGFKEPTPIQRQAIPVLLSGRECFA
CAPTGSGKTFAFICPMLMKLKRPSTDGIRAIILSPARELAAQTAREGKKLIKGSKFHIRL
MTKPLVKTADFSKLPCDVLISTPMRLKRAIKARKIDLSKVEYLVLDESDKLFEQSLLKQI
DCVVKACSNPSIIRSLFSATLPDFVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGT
EEGKLIALRQRFAESLNPPVLIFVQSKERKGTL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagtgtctcttttctgtttggtggaacaaacttcaataggaagaagtttgct
ccagattttgctaagtttaagaattgcacggaagaggatgatgattccaataagaaattg
agcttctttgaggaagaagaggagcctgagaaaaagaagaatattgtgtcatctaagaag
aggaaacgaaaatctgctaattctgagcctgttgaaggatttgatgtgttcaagagctca
aagaaggcacttgttgaaggtaaaaaagaagaacagaacacaaagaatgagattttagag
aattccaagaaggaacttaatcagcgaatggagaaagatgctttgtcgaggaaacagtac
aacattcatgtttccggtaacaatattccacccccacttaaaagcttcgcagagttgtca
tcgaggtatggttgcaagcgatacatattacgcaatttggctgaactaggatttaaagag
cctactccaatccaaaggcaggctattccagttctcctatcgggtcgtgaatgctttgcc
tgtgctccaacagggtcaggaaaaacctttgcttttatttgtcccatgcttatgaaactc
aagcgcccttcaacagatggtataagagcaatcatcctctctcctgcacgagaactggct
gcccagacagctagagaaggaaaaaaacttattaaaggaagcaagttccacatcagatta
atgactaaaccccttgtcaagacggctgatttctcaaagctgccgtgtgatgttctgata
tcaacgcccatgcggctgaaaagagctatcaaagctagaaagattgatttaagcaaggtc
gagtatcttgtccttgatgaatctgacaagctgtttgagcagagcttgttaaaacagata
gattgtgtggttaaggcttgttcaaacccttcaatcatacgctcgctgttcagtgctact
ttgcctgattttgttgaggaacttgcacgttccataatgcacgatgctgttcgtgtgatc
attggccgaaagaacacagcatctgaaaccgtcaagcaaaagctggtatttgctggaact
gaagaagggaaacttatagctcttcgccaaagatttgcagagagtctcaatccaccggtg
ctgatttttgtgcaaagcaaagaacgcaaaggaactctatga
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