Eutrema salsugineum (saltwater cress): EUTSA_v10020925mg
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Entry
EUTSA_v10020925mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10020925mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10020925mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10020925mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
18023555
NCBI-ProteinID:
XP_006408441
UniProt:
V4M192
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MNNGAGEGGSQRRELHGKSKLFLGNDFAYAIAKMAVAQICESAEVNVYQESQTREGVRFS
SFQESALETLTDVAIRYIQSIGMSAHLYANIAGRREGNSLDIVQTLEDLGSGLGFAGVSD
TGRCLADSGVVKDIIRYTGEAEEMPFVYSLPRFPINKEKRPSPSFSEVGAESPDEHIPVW
LPAFPETKLCNRSEETIVGTVEGGPPSKENGPSLSSLQHSFNGGRLEVLNSPKDDRKSKE
EVEGNPFLTAPLRFVEKELSPVFHPLELSNEVARTSHVPDKHLSNDHHIPVLEASAPWDE
INKRNMIVESEDGEKKGGARPQQTLVRFKIGTLKRPSCFAINRSVQEHGWFQEGEDKWEK
KSEIKEKRERIDLGIVESDVN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatggagctggggaaggaggaagtcagagaagagaattacacggcaagagtaag
ctttttctaggcaatgatttcgcctacgccatagcaaaaatggcagtggctcagatttgc
gagagtgcagaggttaatgtgtaccaggaatcacagacacgcgagggcgttaggtttagt
tcttttcaagaatctgctcttgaaacgctaaccgatgtagcgattcggtatatccagagc
attgggatgagtgctcatctgtatgctaacatagccggtagaagagagggtaattctctg
gacatagttcaaacattagaggatttggggtctggtttgggtttcgctggtgtttcagac
actggccgttgtcttgctgattccggtgtagtcaaggatattattcgttatacaggagaa
gcagaggagatgccgtttgtttattctcttcctcgtttcccaattaacaaagagaaaaga
ccttctcctagtttctctgaagttggagcagaatctccagatgaacacatccctgtttgg
cttcctgcatttcccgaaaccaaattgtgtaatcggtcagaggaaactattgtaggcaca
gtcgaaggaggacctccgagtaaagaaaatgggccatctttgtcgagtttacaacattct
ttcaatggtggtaggttagaagtacttaattctccaaaggatgatcgaaaatcaaaagaa
gaagtggaaggtaatccgtttcttaccgcacctcttcgattcgtggagaaggaattgtca
cctgtgttccaccctctggagctttcaaatgaagttgctagaaccagccacgttcctgat
aagcatttgagcaacgatcatcacatcccagttcttgaggcatcggctccatgggatgag
atcaacaagcggaacatgatagttgaatctgaggatggagagaagaaaggtggtgcaaga
ccacaacaaactttggtacgtttcaagattgggactctaaagagaccttcgtgttttgca
ataaaccggagcgtccaggaacatgggtggtttcaagaaggtgaagacaagtgggaaaaa
aagtcagaaatcaaagaaaaacgcgaaagaattgacttgggaattgtcgagtcagatgta
aattag
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integrated database retrieval system