Eutrema salsugineum (saltwater cress): EUTSA_v10020972mg
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Entry
EUTSA_v10020972mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10020972mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EUTSA_v10020972mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18023864
NCBI-ProteinID:
XP_006407667
UniProt:
V4LF77
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MGNLHGLHRSHHAGETSNAHFPPSLAPPSSSSPSRPHMTTVEPYCHVDSSLRSLAGKAEG
FGRAAVGGLSGPICRVTSLADEGPGSLREACKRPDPLWIVFDVSGTINLSSFVNVSSHKT
VDGRGQRVKITGKGLRLKQCENVIICNLEFEGGVGPDADAIQIKPKSSNIWIDRCSLKNY
HDGLIDITRESTDITVSRCHFMNHNKTMLIGADESHVTDRCIRVTIHHCFFDGTRQRHPR
VRFAKIHLYNNYTRHWAIYAVGAGVESQIYSQCNIYEAGEKKTVFKYITEKAGDKEKPEA
GFIRSEGDWLLNGAKSCLSHNGERHVFSPTQHYSEWTVESPTEKLKNFMKHSTGWQNLPL
PPDQTTSTA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacctacacggcctccacaggtcccatcacgccggagaaacctccaacgcccat
ttcccaccgtctctagctccgccgtcttcatcgtcaccatcccgtccccacatgacgacc
gtggaaccttattgccacgtagactccagcctccgctctctcgccggaaaggccgagggt
tttggccgcgccgccgtcggtggtcttagcggcccgatttgccgtgtcacttctctagct
gacgagggtccaggatcgttacgagaggcttgtaagaggccagacccgttatggattgtg
ttcgatgtgtccggaacgatcaatctgtcatcgtttgtgaacgtatcatcgcacaaaaca
gtggacggaagagggcaaagggtgaagataacggggaaagggttaaggctaaaacaatgt
gaaaacgttataatatgtaaccttgaattcgaaggcggtgtaggaccagacgcagacgcg
attcagatcaaaccaaaatcaagcaacatttggattgatcgctgtagtctcaagaattac
catgacggtttgattgatatcacacgagaaagcactgacattaccgtctcaagatgccat
ttcatgaaccacaacaagacgatgttgataggagcggacgaaagccacgtgacggaccga
tgcataagagttacgattcatcactgcttcttcgacggtacacgtcagcgacaccctcga
gttcgcttcgcaaaaatccatctctacaacaactacactcgtcactgggccatctacgcc
gtcggagccggcgttgaatctcagatatactctcagtgcaacatatatgaagctggagag
aagaagaccgtctttaagtacatcaccgagaaggcgggggataaagagaaacctgaagct
ggtttcattagatcagaaggagattggttgttgaatggtgccaagtcgtgtcttagccac
aacggagagcgccacgtgttctctccgacccaacactattctgaatggaccgtcgaatcg
ccaactgagaaactcaagaactttatgaaacactcgaccggctggcagaaccttccgctt
ccacccgaccaaactacgagcaccgcatag
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