Eutrema salsugineum (saltwater cress): EUTSA_v10021116mg
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Entry
EUTSA_v10021116mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUTSA_v10021116mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10021116mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EUTSA_v10021116mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EUTSA_v10021116mg
Prokaryotic type
EUTSA_v10021116mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
LAS2
Motif
Other DBs
NCBI-GeneID:
18023753
NCBI-ProteinID:
XP_006406583
UniProt:
V4NNJ0
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MASSTSKTLMDFFQPAKRLKASSSSSSFPAVSAAGGSRDLGSAAKSPPRITVNNSVADDS
SGLTPEQISRSEFNKFVAKSKRNLAVCTEKVTKAKAKGSCYVPLSELLVEESWVKAIPGE
LHKPYAQNLSDFLEREIIADCKGPPIYPPQHLVFNALNTTPFDRVKAVIIGQDPYHGPGQ
AMGLSFSVPEGEKLPSSLLNIFKELQKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ
PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDGNKHHILTAAHPSGLS
AHRGFFNCRHFSRVNQLLGQMGIPPIDWQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcaacatccaaaaccctaatggatttttttcaacccgccaaacgcctcaaa
gcttcctcgtcttcttcctcttttcccgccgtttccgccgccggtgggtcacgcgatctg
ggttcggcagctaaatcgccgcctcgcattacagttaacaattccgtcgccgacgattcg
tctggcctcacacccgaacaaatctctcgctccgagttcaataaattcgttgccaaatcc
aagcgcaacctcgccgtctgcaccgagaaggtcacaaaagcgaaagctaaaggaagctgc
tacgtgccgttgagtgagctcttagtggaagaatcatgggttaaggctattcctggagaa
ttgcataaaccctacgctcaaaacctttctgatttccttgaacgtgagatcatcgctgac
tgtaaaggccctcccatttatccgcctcagcacttggttttcaatgccctcaacacaact
ccttttgatcgtgtcaaggctgtcattatcggacaggatccttaccatggacccggtcaa
gctatgggtttgtccttctctgtgcctgaaggagagaagcttccttctagccttttgaac
atatttaaggagcttcagaaagatgttggctgttcaatcccacgtcatggtaatctacag
aaatgggctgtgcagggtgttttgctgctaaatgctgttcttacagtaaggagcaaacag
ccgaattcacatgcaaagaaagggtgggaacaattcactgatgctgttattcaaagtatc
tcacagcagaaggaaggtgtggtctttctcctctggggaagatacgctcaagagaaatcc
aagttgatcgatgggaataaacatcatatactcacagcagctcatccatctggtttatcg
gcgcacagaggcttctttaactgcaggcatttctctcgagtaaaccagctactcgggcaa
atggggattccacccatagactggcaactttaa
DBGET
integrated database retrieval system
