KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10021128mg
Entry
EUTSA_v10021128mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03010  Ribosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    EUTSA_v10021128mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10021128mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eus04147]
    EUTSA_v10021128mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     EUTSA_v10021128mg
Exosome [BR:eus04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   EUTSA_v10021128mg
  Exosomal proteins of colorectal cancer cells
   EUTSA_v10021128mg
  Exosomal proteins of bladder cancer cells
   EUTSA_v10021128mg
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_SPT8 DSE1_N Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 ASA1 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_NOL10_N TRM82_WD Beta-prop_WDR41 Beta-prop_DCAF12 Beta-prop_RIG_2nd CFAP251_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR19_1st eIF2A PAC11 Tricorn_2nd DUF7899 WD_LRWD1 DUF4934 Beta-prop_NUP159_NUP214 Beta-prop_pof12
Other DBs
NCBI-GeneID: 18024568
NCBI-ProteinID: XP_006406649
UniProt: V4M005
LinkDB
Position
Unknown
AA seq 327 aa
MAEGLVLKGTMRAHTDMVTAIATPIDNSDIIVTASRDKSIILWKLTKDEKSYGYAQRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGVSTRRFVGHTKDVLSVAFSVDNRQI
VSASRDRTIKLWNTLGECKYTISEQGDGHKEWISCVRFSPNTLVPTIVSASWDHTVKVWN
LQNCKLKNSLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS
LCFSPNRYWLCAATENSIKIWDLESKSVVEDLKVDLKAEAEKSDGGVGTGNQKKVNYCTS
LNWSADGSTLFSGYTDGVVRVWGIGRY
NT seq 984 nt   +upstreamnt  +downstreamnt
atggccgagggactcgtattgaagggcaccatgcgcgcccacaccgacatggtcacggcc
atcgccacgccgatcgacaattccgacatcatcgtgacggcgtcgcgtgacaaatccatc
atcctctggaaactcaccaaggacgagaaatcctacggttacgcgcagcgaaggctcact
ggtcactcccatttcgtggaggatgtcgttctctcatcggacggtcagttcgctctctcc
ggaagctgggacggcgagctccgtctctgggatctcgccaccggcgtctccacaagaaga
ttcgtgggacacacgaaagacgtgctctccgtcgctttctctgttgataaccgtcagatc
gtatctgcgtctcgtgaccgtacgatcaagctgtggaacactcttggtgagtgcaagtac
acgatctccgagcaaggtgatggtcacaaggagtggattagctgtgttaggtttagtccc
aacacgcttgtgcccaccattgtctctgcttcgtgggatcacaccgtgaaagtgtggaac
ctccagaactgcaagctgaagaactctctcgccggacattccggttacctcaacacggtg
gccgtctcgcccgatggttcgctgtgcgcgagtggtgggaaagacggtgtgatcttgttg
tgggatttggcagaaggaaagaagctgtactcgcttgaggctggctcgattatccactcg
ctttgctttagcccgaacaggtactggctgtgtgctgcaacagagaacagtatcaagatc
tgggatcttgagagcaagagtgttgttgaggacttgaaggttgacctcaaggctgaggct
gagaagtctgatggtggtgtcggaactggtaaccagaagaaggtgaactactgtacgagc
ttgaactggagtgcagatggaagcacgttgttcagtggttacacagatggagttgtcagg
gtctggggtattggtcgttactag

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