Eutrema salsugineum (saltwater cress): EUTSA_v10021423mg
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Entry
EUTSA_v10021423mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
eus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10021423mg
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EUTSA_v10021423mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eus01009
]
EUTSA_v10021423mg
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10021423mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10021423mg
Protein phosphatases and associated proteins [BR:
eus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EUTSA_v10021423mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EUTSA_v10021423mg
SWI/SNF complex
EUTSA_v10021423mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EUTSA_v10021423mg
PBAF complex
EUTSA_v10021423mg
SWI/SNF complex
EUTSA_v10021423mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
18024460
NCBI-ProteinID:
XP_006406714
UniProt:
V4M050
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MKSSGSTAWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVVFAKRTV
KDLKLPPAFVTQIAQSIQSQLSDFRSYEGQDMYTGEKIIPIKLDLRINHTLIRDQFLWDL
NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAVQSVTSARESRLSKKGRRG
SDHGSASKASGLSMDLVKLFSFKSSVVRKRKDLDVYEPAVDMLTNEEVDALEAREERHAR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttcagggtctactgcatggaaaggtcccgtcaagttcaggatgcctactgct
gaaaacttggttcctattcgtttggatattcaattcgagggtcagcgttacaaagatgct
ttcacttggaacccttcagacccggataatgaggttgttgtcttcgctaaaaggactgtt
aaagacttgaaacttccccctgcgtttgtcactcagattgcccaatctattcagtctcag
ctctcagactttcggtcatatgaaggacaagacatgtacactggtgaaaaaatcatacca
atcaagcttgatctccgaattaaccatacccttatcagggatcagttcttgtgggaccta
aacaattttgagagtgatcctgaagaattcgcaagaaccttgtgcaaggatttaggtgtt
gaagatcctgaagttgggcctgctgttgcctttgcaatcagagaacaactttacgagatt
gcagttcaaagtgtgacttctgctagggagagtagattaagtaagaaaggccgcagagga
tctgatcatggttcagcgagcaaggcaagtggcttgtcaatggacctagtgaagttattc
agctttaagtccagtgtagttcggaaacggaaagacttggatgtttatgaaccagcggtg
gatatgctaacaaatgaggaagttgatgcgcttgaagccagagaagagaggcatgcaagg
taa
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