Eutrema salsugineum (saltwater cress): EUTSA_v10022194mg
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Entry
EUTSA_v10022194mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10886
DNA-repair protein XRCC4
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EUTSA_v10022194mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10022194mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
EUTSA_v10022194mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
VPS38
Motif
Other DBs
NCBI-GeneID:
18023363
NCBI-ProteinID:
XP_006406090
UniProt:
V4M5J7
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MVESERTKHTCLRLEISGADPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVVDRAAQW
DQPVSEYLKLAEQYLGFQQPDSVYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHDSK
KITEEVVNKTSSFEEMTSEAEKCLSQGEKLCNEKTEFENATYAKFLSLLNTKKAKLRALR
DKEDSERAVEEEESTDKAESFESERSDNEQREEEASKKATTTRNKARGRKRAALS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatcggagagaacgaagcacacatgtctccggcttgaaatctccggcgccgat
ccaattttcgtcaaaggcacttggtaccattctcgtttcgatatctccgtcaccgatggc
tcctcctcttggatttgcaatgcgactgaggaggaggtggtggatcgagcagctcaatgg
gaccagccggtgtcggagtatctaaagctcgccgaacagtacttagggtttcagcaacct
gattctgtctatggtttctccgatgcccttgagggatgtaaacggctctcttggacgttt
gagaaggaagggactaaactcgaatggcggtggaaatgtaaaccatcacatgacagcaag
aagatcacagaagaagttgtgaacaagacgagttcttttgaggagatgacaagtgaagcc
gagaaatgcctatcgcaaggtgaaaaactctgcaacgaaaaaacggagtttgaaaatgca
acttatgcaaagtttctttccttgctaaacacaaagaaggcaaaactcagagcactaagg
gacaaagaagattcagagagagcagtagaagaggaagagtcgacagacaaagctgaaagc
tttgaaagtgaaagaagtgacaatgagcagcgcgaggaagaagcctcaaagaaggcaacg
acaacacgcaacaaagcccgaggccggaagagagctgcgctcagctaa
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