Eutrema salsugineum (saltwater cress): EUTSA_v10022286mg
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Entry
EUTSA_v10022286mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10022286mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EUTSA_v10022286mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EUTSA_v10022286mg
Prokaryotic type
EUTSA_v10022286mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF674
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
18024499
NCBI-ProteinID:
XP_006408145
UniProt:
V4MAZ2
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MKLNKTVSSCLSSLLKPYSSLSLHWTTTMATTANPLESKKTVDESDVGISCFISQLPGFR
GILKQRYADFIVNEVDMDGNVVHLTSLDVSPEMDEKEEEKTKSSDDVPQSYASAIESFRS
ISSVTDAERLETLINQVTSVTDDEISPVVFDPSSDKSKRTAIHNFVKENFKFLVTDTVDG
PDPTSKCIRVRVNSADHNSRGKRSKKRKERGDKPFDSRGSEHWPEHLGKFVKFHLYKENK
DTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSSQRVTVFKQQASKLAALNKRLFGIKVGD
FCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVP
THHVGAAVLKGEWKEAVDMILDPREINEAREYYKETGDIDGTLRQLPRYLVAERAILQCL
KKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLVSTKVDDA
KRIVGSLTSEHKENNEEALDCDQLDDTAVVDLSGERSDLVKVVDIEDMEAGTYSTSDIVL
PLPGSRVIYPSNDIAEIYHNLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEW
ELLTYTDSNKPLAETDLDRITLEKTRDKVGSAEEIESMKSDSRPPESCESDLKDTGNPVS
EQTQLALKMALTLPSSCYATMAIRELLKTSTS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaataaaactgtatcgtcttgtttgtcgtctctgctaaaaccctactcgagc
ttgagcttacactggacaacgacaatggcgacgactgctaacccccttgagagtaagaaa
accgtagatgaatctgacgtgggcatctcctgtttcatctcccagctcccgggcttccgc
ggaattctcaaacaaagatacgcagactttatcgttaatgaagtggatatggatggcaat
gttgttcatttgacatccttggacgtctctcctgagatggatgagaaggaggaagagaaa
acgaaaagttcagatgatgtaccccaaagctatgcctctgcaattgagtcgtttagatca
atttccagtgtcactgatgcagagcgtttggaaactttgattaatcaagtcacctccgta
actgatgatgagatctcaccagttgtttttgatccaagttctgacaagtctaagagaacg
gctatccacaactttgttaaagagaatttcaagttcctagtgaccgacactgtagatggt
cctgatcctacatcaaaatgcatccgcgtgcgggtgaattcggcagaccataacagcaga
ggtaaaagatcgaaaaagcggaaggaaagaggcgataagccttttgatagcagaggctca
gaacattggccagagcatcttggcaagtttgtcaagttccatctttacaaggagaacaaa
gatacacaagaggccttgggattgatcggaaagatgctaggcgttcagccaaagtccttc
ggattctctggaacaaaagataagcgatcagtttcaagtcagcgtgtaactgtgttcaaa
cagcaagctagcaaattggctgcacttaacaagagattgtttgggatcaaagttggtgac
ttctgccatgtcaaggagggccttctccttgggcagctcatgggaaacagatttaccatc
acattgagaggagtggttgcggattctgaagaaactataaaaaagtctgcagaatccttg
gggaaagatggcttcatcaactactttggcttgcagcgttttggaagtggctcagttcca
acccaccatgttggagctgcagtactgaaaggagagtggaaagaagcggtagacatgatt
cttgatccaagagaaataaatgaggcccgggaatattacaaagaaactggcgatattgac
gggactctaaggcaactaccgcgataccttgttgctgaaagagccatactgcagtgtctg
aagaaatgtcctgggaactacctgcaggctctgaaaggcatacccagaactttgagaatg
atgtatgtacatagttatcaaagctacttatggaacaatgcagcaagtctgcgtgtccaa
aaatacgggaccaaccaagttgtgttgggggacttggtaagtacaaaggtagatgatgca
aagaggattgtcggcagtttgacctctgagcacaaggaaaacaacgaagaggcattggat
tgcgaccaattggatgatactgctgttgttgatctttcaggagaaaggagtgaccttgtt
aaggttgtagatatagaggatatggaagctggaacttactcgactagtgacatcgtcctt
cctctacctggttcaagagtgatttacccgtctaatgacatcgcagaaatctatcataat
ttggcaaagaaggacggtatcagcctaactgagagtattcacggtgtaaaggagttctca
ataactagcatgactggtggttatagacgtgttttccagaaaccaatcgactttgagtgg
gaattactgacttacactgacagtaataaaccattggcagagacggatctggacaggata
accctggaaaagacgagggataaggttggatctgctgaagaaattgaatcgatgaaatcc
gatagcaggccacccgaatcctgtgaaagtgatttgaaagacactggaaacccagtttct
gagcagacacagttggcgctcaaaatggctctcactcttccatcgtcttgttatgcaaca
atggctatcagagagctgttaaagacgtcaacttct
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