KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10022422mg
Entry
EUTSA_v10022422mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10022422mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10022422mg
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10022422mg
Spliceosome [BR:eus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    EUTSA_v10022422mg
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    EUTSA_v10022422mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10022422mg
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 18024013
NCBI-ProteinID: XP_006407054
UniProt: V4M155
LinkDB
Position
Unknown
AA seq 203 aa
MSQLNIALKKNTMRKNKKLVINIAPKKEGLASRLEADQELGSSRFDEKKRLESSERRRDV
VQRVCSKAEEINDRPSARDGVMREVEVGTGLFGALKLLREQGTFKEKRKLVGVRANNHED
DRFRDAFKDIRIDRVDEHGRILSTKEAYRALCHQFHGKKPGARKQEKRKRKHEDNPKHIE
FAYRAVQRLRQIHAELKSPYIVL
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtctcagctcaatattgctttgaagaagaatacgatgaggaagaataagaaattagtt
ataaatattgctccaaaaaaagaaggtcttgcttcaagacttgaagctgatcaggaactt
ggttcttcaagatttgatgagaaaaagaggcttgaatcatcagagaggcggagagatgtg
gttcaaagggtttgttccaaagctgaagagattaatgatcgtcctagcgctagagatgga
gtgatgcgtgaggttgaagtcggtacaggattattcggcgcattaaaactacttagagag
caaggaactttcaaggagaaaagaaagcttgtaggtgttagggccaataatcatgaagac
gacagattcagagatgctttcaaggatattcggattgacagggttgatgagcatggcagg
atattgtctacgaaagaagcgtatcgggcactgtgtcaccagttccatgggaagaaacct
ggggcgaggaagcaagagaaacggaagaggaaacatgaagataacccaaaacacatagaa
tttgcatatagagctgtgcaaagactgagacaaattcatgcagaattgaagagtccttac
attgttctctaa

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