Eutrema salsugineum (saltwater cress): EUTSA_v10022461mg
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Entry
EUTSA_v10022461mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EUTSA_v10022461mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10022461mg
DNA repair and recombination proteins [BR:
eus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EUTSA_v10022461mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_15
RNase_Y_N
OmpH
DUF1690
SRPRB
Motif
Other DBs
NCBI-GeneID:
18015343
NCBI-ProteinID:
XP_006397403
UniProt:
V4N1B1
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MNTLSPHLLIPTAINIRTSRAALPSPPCSFSPSFLRAASPSVLCITSSEDAQSIENQTLE
VLEWRALCNQLSPFASTSMGLSATKTADIPVGNSLEESRNLLDETAAALAAMEVMESRRL
GLSEILDLSDIVERATAGQYLTVRELCAVRSTLMAASSVFEKLQRAANSDKRVTPLVDIL
EGCDFKNTLVQKIGFCIDCNMSTILDRASEDLEIIRSERKRNMETLDSLLKEVSIRIFQA
GGIDKPLITQRRSRMCVAVRATHKSLLPGGVVLSVSSSRVTCFMEPKEAVELNNMEVRHA
NSEKAEEMAILSILTSEVSTGQRGILHLLNKILELDIAFARASHAKWMNGVYPKLTSEHS
NTLNLNGDCKSLALDIDSAQHPLLLGSVLGNLNGGNTFPVPIDIKVESRSKVVIISGPNT
GGKTALLKTLGLISLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSGHISR
IRQILDIASENSLVLLDEICSGTDPSEGVALATGILQYIKNRVNVAVVSTHYGDLNSLKD
NETQFQNAAMEFSMETLQPTFRVLWGSTGESNALRVAKSIGFNGRILEHAHKWTEKLMPE
KEVERKGSLFQSLIEERNTLNLQATKTAAFHRDVMNLYHELEHESHDLEKREKALLKKVS
QKVQEDLNSAKSKMQKLVAEFESQLEIAQADQYNSLILKTEEAVAEIIKACCPNDLVSTG
EPYSDYMPQAGEKVLVTGLGGKLGTVVEEPGDDDTVLVQHGKIRVRIKRKDVKPLPRNRT
SETPNRSLRSKRQINMKELGSVLQMQSEPVRIQTSKNTLDLRGMRAEEAIHQLDMAISGR
DSGSILFIVHGMGAGVIKELVLGRLSKHTRVSRYEQANPMNHGCTVAYIK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctttccccccatttgctcataccgacggctattaatatcagaacatcacgc
gccgccttgccgtcccctccatgctccttttctccatcctttttacgtgccgcctcaccg
tctgttctatgcatcacctcgtcagaagacgcacagtcaatcgaaaaccaaactctagag
gtcctagaatggcgcgccctctgcaatcagctgtctcctttcgcctccacatcaatgggc
ctctccgccaccaaaaccgccgatattccggtgggaaactcgctggaagagagcagaaac
cttcttgacgagacggcggctgctttggcggccatggaggtaatggaatcgcggcgattg
ggtctctctgagatccttgacttgtctgatatcgtagagcgtgctacggcgggtcaatat
cttaccgttagagagctctgcgccgttcgaagcacgttaatggcggcttcatcagtgttt
gagaaactacaaagagcagctaatagtgataagcgggttaccccacttgtagatatactt
gaggggtgtgatttcaagaatacactggtgcaaaagattggtttttgtatcgactgcaac
atgtctacgattcttgacagagccagtgaagatctagagatcataagatctgaacggaag
agaaacatggagactttggattctcttctgaaggaagtctcaattaggatatttcaagct
gggggaatcgacaagcccttgataacacagcgcaggtcaaggatgtgcgtagctgttaga
gctacacacaaaagtttacttccaggtggtgttgttctaagtgttagtagctcaagggta
acatgctttatggaaccgaaagaggcagtagagcttaataacatggaagtgaggcatgca
aactccgagaaagccgaggaaatggcgattttgagcattttaacatctgaagtctccact
gggcagagagggatattgcatttgttgaataaaatattggaacttgacattgcttttgca
agagcatcacatgcaaaatggatgaatggtgtctatcccaaattaacttcagaacactct
aacacactaaacttgaatggagactgtaaatctttagctttagacattgattctgcgcag
catccgctacttcttggatccgtattaggtaacctcaatggtggaaacactttccctgtg
ccaatagacattaaggttgagagcagaagcaaagtagttatcatctcgggtccaaacaca
ggagggaagaccgctttattaaagacattgggattaatctctcttatgtcgaagtcaggg
atgtatttacctgctaagaattgcccgaggttgccttggtttgatcttattctggctgac
atcggggatccccagtctttagagcaaagtctctcaaccttcagcggccacatatcaagg
atacgtcagatacttgacattgcttcagaaaattcgcttgtcctactagacgaaatctgt
agtggaactgatccatcagaaggggttgcacttgctactggtatcctacaatatattaaa
aaccgtgtcaatgtggctgttgtatccacacactatggtgacttaaatagcttgaaggat
aacgagactcaattccaaaatgctgcaatggagttctcaatggaaactttgcagcctacg
tttcgagtactatggggaagtactggtgaatcaaatgcattgagagtagctaagtcaatt
ggtttcaatggaagaatattagagcatgcacataaatggacagagaaattaatgccagag
aaggaagtagagcgaaaaggctcgctctttcagtcccttatagaagaaaggaatacgcta
aatcttcaggcaaccaagaccgcagcttttcacagggacgtaatgaacctttaccacgag
cttgagcacgagtcgcatgatcttgagaaacgtgagaaggctcttctgaagaaagtttct
caaaaggtacaagaagatctaaactctgctaagtcaaagatgcagaaactggtggctgaa
ttcgaaagtcaattagaaattgctcaggccgatcaatacaattctttaattctgaaaacc
gaagaggcagttgcagagattattaaagcttgctgtcctaacgatcttgtatcaacggga
gaaccgtatagcgactacatgccacaagcaggtgaaaaggttcttgtgactggactgggg
ggtaagttaggtaccgtggttgaagaacctggagatgatgacacagttctagtccagcac
ggtaagataagggtacgcataaagagaaaggacgtaaagccccttcctcgtaatagaact
agtgaaacacctaaccgttctctacgttcaaagagacagataaacatgaaagagctaggc
agtgtgttacagatgcagagcgaaccagtgcggattcaaacgtcaaagaacacattggat
ctaagaggaatgcgagcggaagaagcaattcaccagctagacatggccatctcgggaaga
gactcgggttcgatcctctttatcgttcacggaatgggggcaggcgttataaaggagctt
gtgcttgggaggttaagcaagcacactcgtgtctcaaggtatgagcaggcaaatcctatg
aaccatggatgtacagttgcttacattaaataa
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