Eutrema salsugineum (saltwater cress): EUTSA_v10022469mg
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Entry
EUTSA_v10022469mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10881
26 proteasome complex subunit DSS1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03050
Proteasome
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
EUTSA_v10022469mg
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10022469mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10022469mg
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10022469mg
03051 Proteasome [BR:
eus03051
]
EUTSA_v10022469mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10022469mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
EUTSA_v10022469mg
Membrane trafficking [BR:
eus04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
EUTSA_v10022469mg
Proteasome [BR:
eus03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
EUTSA_v10022469mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
EUTSA_v10022469mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
18015339
NCBI-ProteinID:
XP_006397412
UniProt:
V4KLT3
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MSEFWIAVGNHFCKLFDRVLEIWGKTYAIISGEEHITPVMVSLKLSERLGFHAFQSLTRG
NFEILLPTSSILFLKKLIDLRDNLSQISRSCWLLKQSVTMAVEPKATTEEVKMDLFEDDD
EFEEFEINEDWVEKEEVKEVGQQWEDDWDDDDVNDDFSRQLRKELESSTDNK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattctggattgcggtcggaaatcacttctgcaaactttttgatcgtgtgctc
gagatttggggaaaaacttatgcgataatttccggtgaagagcatataactccagtgatg
gtttcgttaaagctctcagagaggttagggttccatgcttttcaatctcttacacgagga
aactttgagattctccttcctacgtcgtcaattttatttttgaaaaagcttattgattta
cgtgataatctttcccagatttctcgatcttgttggttgcttaaacaatctgtaactatg
gcggtagaaccaaaggcgacgactgaggaagtaaagatggatctgttcgaggacgacgat
gagttcgaggaatttgagatcaacgaagattgggtggagaaagaggaagtgaaggaagtt
ggtcagcaatgggaggatgactgggatgatgatgatgtcaacgacgacttctcgcgtcag
ttaaggaaggaacttgagagtagtactgataataaatga
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